Gene Information

Name : SPD_1253 (SPD_1253)
Accession : YP_816720.1
Strain : Streptococcus pneumoniae D39
Genome accession: NC_008533
Putative virulence/resistance : Virulence
Product : transcriptional repressor
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1281817 - 1282026 bp
Length : 210 bp
Strand : -
Note : equivalent gene in S.pneumoniae TIGR4 = SP1423; equivalent gene in S.pneumoniae R6 = spr1279; identified by match to protein family HMM PF01381

DNA sequence :
GTGGCTAAAAATTTAAAATTAAAATTAGCTCGGGTAGAGCGTGATTTAACACAAGGTCAACTGGCAGAGGCTGTCGGGGT
GACACGCCAGACTATTGGTTTGATAGAGGCGGGAAAATACAATCCCAGTCTCTCGCTCTGCCAGTCTATTTGCAGATGTT
TAGGGAAAACCCTAGACCAACTATTTTGGGAGGAAGAAGATGAAAAATAG

Protein sequence :
MAKNLKLKLARVERDLTQGQLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQLFWEEEDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-08 44
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-08 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPD_1253 YP_816720.1 transcriptional repressor VFG2168 Protein 2e-08 44
SPD_1253 YP_816720.1 transcriptional repressor VFG2175 Protein 2e-08 44