Gene Information

Name : STER_0354 (STER_0354)
Accession : YP_819853.1
Strain : Streptococcus thermophilus LMD-9
Genome accession: NC_008532
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 310055 - 310744 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAAACGCATTTTGATTGTTGAAGATGAGAGAAACCTTGCTCGTTTTGTCTCTCTTGAACTTCAACACGAAGGATA
CGACGTTGTGACAGCGGACAACGGACGCGAAGGACTTGAAATGGCACTTGAGAAAGATTTCGATCTTATTCTCTTGGACC
TTATGTTGCCTGAGATGGACGGTTTCGAAGTGACACGTCGTCTCCAACAAGAAAAAGATACTTATATTATGATGATGACA
GCTCGCGACTCAATCATGGATATTGTTGCTGGTTTGGATCGTGGAGCTGATGAGTATATTATAAAACCATTTGCGATTGA
AGAACTGTTGGCACGTATTCGTGCAACTTTCCGTCGTCAAGATATCGAAGCTACTAAGAAGGCACCAGCTAAAGCGTCAA
CCTATCGCGATTTAAAATTGGATGTTCAAAACCGTGCAGTTGTTCGCGGTGATGAGGTAATTCCATTGACAAAACGTGAG
TTTGATTTGTTGAACACACTTTTAAGCAATATGAACCAAGTAATGACCCGTGAGGAACTCTTGCTTCAAGTCTGGAAATA
TGATGACGTAATTGAAACAAACGTTGTAGATGTTTATATTCGTTACTTACGTGGGAAAATCGACATTCCAGGTAAGGAAT
CATACATTCAAACAGTACGAGGGATGGGTTACGTTATCCGTGAAAGATGA

Protein sequence : 
MSKRILIVEDERNLARFVSLELQHEGYDVVTADNGREGLEMALEKDFDLILLDLMLPEMDGFEVTRRLQQEKDTYIMMMT
ARDSIMDIVAGLDRGADEYIIKPFAIEELLARIRATFRRQDIEATKKAPAKASTYRDLKLDVQNRAVVRGDEVIPLTKRE
FDLLNTLLSNMNQVMTREELLLQVWKYDDVIETNVVDVYIRYLRGKIDIPGKESYIQTVRGMGYVIRER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STER_0354 YP_819853.1 DNA-binding response regulator HE999704.1.gene1528. Protein 2e-59 59
STER_0354 YP_819853.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 7e-49 52
STER_0354 YP_819853.1 DNA-binding response regulator AE015929.1.gene1106. Protein 7e-46 52
STER_0354 YP_819853.1 DNA-binding response regulator BAC0125 Protein 1e-37 44
STER_0354 YP_819853.1 DNA-binding response regulator NC_012469.1.7685629. Protein 6e-36 44
STER_0354 YP_819853.1 DNA-binding response regulator AE000516.2.gene3505. Protein 2e-34 43
STER_0354 YP_819853.1 DNA-binding response regulator HE999704.1.gene2815. Protein 1e-39 43
STER_0354 YP_819853.1 DNA-binding response regulator AE016830.1.gene1681. Protein 2e-40 41
STER_0354 YP_819853.1 DNA-binding response regulator BAC0197 Protein 9e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STER_0354 YP_819853.1 DNA-binding response regulator VFG1390 Protein 1e-40 45
STER_0354 YP_819853.1 DNA-binding response regulator VFG1389 Protein 5e-34 43
STER_0354 YP_819853.1 DNA-binding response regulator VFG0596 Protein 8e-36 41