Gene Information

Name : STER_1417 (STER_1417)
Accession : YP_820775.1
Strain : Streptococcus thermophilus LMD-9
Genome accession: NC_008532
Putative virulence/resistance : Unknown
Product : IS861, transposase (orf2), IS3 family, truncated
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1327175 - 1327813 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence :
TTGATTAACCACAAAAAAGTCCAATGCTTGATGAAAGAACTTGATTTGGCAGCCCGTATTCGTCGTAAACGCAAGTATTC
ATCTTACAAAGGTGAGATTGGCAAGAAAGCAGATAATTTCATCCAACGACAATTTGAAGCTTCAAAGCCCTACGAAAAAT
GTTATACCGATATCACAGAATTTGCCATTCCAGTCAGTTCACAAAAGCTATATTTATCACCGGTTTTAGATGGCTATAAT
AGCGAGATTATCGCTTATCAGCTATCCACTTCACCGAATTTAGAACAAGTCAAAGCTATGTTAACACAAGCTTTTCCAGA
AGAACATTATGACCAGACGATTCTTCACAGTGACCAAGGTTGGCAATATCAACACCAGTTTTATCATGATTTTCTTAAGA
AAAATGGAATTCGTCCATCCATGTCCCACAAGGGAAACAGTCCAGATAACGGTATGATGGAATCTTTCTTTGGCATCTTA
AAATCTGAAATGTTTTATAGTTTTGAGAAACAATTCAACTCACTTGACGAGCTCAAACAATCCATTATCAATTACATTGA
TTATTACAACAACAAACGCATTAAAGTAAAATTAAAAGGACTTAGTCCTGTGCAGTACAGAACTAAATCCTTTCAATAA

Protein sequence :
MINHKKVQCLMKELDLAARIRRKRKYSSYKGEIGKKADNFIQRQFEASKPYEKCYTDITEFAIPVSSQKLYLSPVLDGYN
SEIIAYQLSTSPNLEQVKAMLTQAFPEEHYDQTILHSDQGWQYQHQFYHDFLKKNGIRPSMSHKGNSPDNGMMESFFGIL
KSEMFYSFEKQFNSLDELKQSIINYIDYYNNKRIKVKLKGLSPVQYRTKSFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-69 75
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-69 75
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 2e-43 50
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-35 49
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 6e-19 44
tnp BAG06206.2 transposase for ISSau4-like Not tested Type-VII SCCmec Protein 5e-21 44
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-25 43
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-25 43