Gene Information

Name : LEUM_0952 (LEUM_0952)
Accession : YP_818431.1
Strain : Leuconostoc mesenteroides ATCC 8293
Genome accession: NC_008531
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 952356 - 953198 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence : 
ATGCATAGTATTGAATTATTCATTGACGGACTAACAAAATATAATTTCTTGCAAACAGCATTAGTTACATCGATATTAGT
TGGGATTATGTCAGGAATTATCGGGTCCTTCATCATATTACGAGGCATGTCTTTAATGGGTGATGCAATTTCGCATGCCG
TATTACCTGGTGTTGCGGTTGCATACATGCTCGGGATTAACTTGTTACTCGGTGCTTCTGCCTTTGGTATTTTGGCAGCA
TTACTAATCGGTGTTGTCACGATGAAGTCAAAGTTGAAAAATGACACAGCCATAGGAATCGTATTTTCAGCTTTCTTCGC
ATTGGGATTTATTCTTATTTCATTGGCAGAGTCTGCTACTAATTTGCATCACATTTTATTTGGAAACGTCTTAGCTGTTT
CTGACAGTGATTTAATTACTACTGCAATCGTGCTTTCTATAGTATTATTGTTTGTTGTTACCTTTTACAAAGAGTTACTT
ATCACATCATTTGACAATACTTTTGCTAAAGCCTATGGTCTTAAAACTCAAATTATGCATTACGCTCTAATGCTTGTTTT
GACCTTAGTTACGGTGACAGCTTTGCAAACAGTCGGAATTATCTTAATTGTGGCCATGTTAATTACACCAGCAGCTACGG
CTTACTTGTTAACAAATCGTATGTCTCATATGATGATTGTTGCTGCTATCTTTTCTGTAATATCATCAATTGTAGGCTTG
TACCTGAGTTTCACATTTAACTGGGCGTCAGGTCCTGCAATTGTTCTTACAGCAGCAATTTTCTTTACATTGGCCTTTAT
CTTTGCACCAAAACAAGGCATTGTCTTCAAAAGAAAGTCTTAA

Protein sequence : 
MHSIELFIDGLTKYNFLQTALVTSILVGIMSGIIGSFIILRGMSLMGDAISHAVLPGVAVAYMLGINLLLGASAFGILAA
LLIGVVTMKSKLKNDTAIGIVFSAFFALGFILISLAESATNLHHILFGNVLAVSDSDLITTAIVLSIVLLFVVTFYKELL
ITSFDNTFAKAYGLKTQIMHYALMLVLTLVTVTALQTVGIILIVAMLITPAATAYLLTNRMSHMMIVAAIFSVISSIVGL
YLSFTFNWASGPAIVLTAAIFFTLAFIFAPKQGIVFKRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 5e-44 57
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 4e-44 57
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-31 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-31 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-31 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-31 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_0952 YP_818431.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 2e-31 42
LEUM_0952 YP_818431.1 Mn2+/Zn2+ ABC transporter permease BAC0442 Protein 4e-30 42
LEUM_0952 YP_818431.1 Mn2+/Zn2+ ABC transporter permease BAC0441 Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_0952 YP_818431.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 2e-31 42