Gene Information

Name : LEUM_0571 (LEUM_0571)
Accession : YP_818058.1
Strain : Leuconostoc mesenteroides ATCC 8293
Genome accession: NC_008531
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 541682 - 543736 bp
Length : 2055 bp
Strand : -
Note : -

DNA sequence :
ATGGCACAACAAGATTCGTTTGGTTTTGGTAATTTAGATGAAATGTTTCGCGCAATGAATGAACAAATGGCGCAAGCACA
AGGACAACAAAATACACAAGCACAAAAAAATAATAATGGTAATAAAAAAAGACGCTTACTTGATGAGTTTGGTATTAATT
TAACCAAACAAGCTCGCGACGGAAAGCTCGACCCTGTTATTGGTCGAGATAACGAAGTTGCTCGCACAATTGAAATTTTA
AATCGTCGTACAAAGAATAATCCAGTACTAATTGGTGAACCTGGTGTTGGTAAAACAGCTATTGTTGAAGGCCTAGCGCA
AGCTATTGTAGCTGGAAAGGTGCCTGAAAAGTTACAGCATAAAGAAGTTATTCGTTTGGAAATGTCGGCCTTAGTTCAAG
GTACGAGCATGCGTGGTCAATTCGAAGCACGGATGCGTGAATTAATGAAAGAAGTTACGAACAGCGATGATGTCATCTTG
TTCATTGATGAAATTCATGAAATTATGGGTGCCGGAAATGCTGAAGGTGGTATGGATGCAGGTAATATTTTGAAGCCTGC
CCTAGCTCGTGGTGAGTTCCAATTAATCGGTGCAACAACTTTAAATGAGTATCGAAAAATTGAAAAAGATGGTGCTATTG
CCCGTCGTTTCCAGCCAGTGCAAGTCGAAGAACCTTCTAAAGAAGAAACTATCACGATTTTAGAAGGAATTAGTGAACGG
TATGAAAAGTATCACTATGTTACATTCAGTGATTCTGCCCTTCAAGCAGCTGTTGAACTATCTGATCGTTACATTCCAGA
AAGATTCCTACCGGATAAAGCAATTGATTTACTTGATGAAGCTGGCTCACGTAAAAATTTGACAATGAAAGTTGCGGACC
CCAAAACTATTCAAGTGAATATCGAAGCAGCTGATAAATTAAAGCAAGAAGCAATTGATAAAGAAGATTTTGAAAAAGCA
AGCTATTGGCGTGATCAGGTAAACCAACTTGAGTCACAAAAGGCACAAGTCGAGGCTCACCCCGAGATGTCAAAGCCACA
AACAGTAACAGAGCAAGATATATTAAAAATTGTTGAAGATAAAACTGATATTCCTGTTGGAGCTTTAAAAGAAAACGAGG
CTAATCAACTAAAAGATTTGGATAAAAACTTATCGAAACATGTAATTGGTCAAGATGAGGCAGTAGAAAAACTAGCCAAG
GCGATTCGCCGTAATCGTATTGGTCTAACAAAATCTGGTCGTCCAATTGGATCATTCCTATTTGTCGGGCCGACCGGTGT
TGGTAAAACTGAAACTGCCAAGCAATTAGCTAAGGAAATGTTTGGTAGCAAAGATGCAATGATTCGTTTCGACATGTCAG
AGTACATGGAAAAACATACCGTTTCTAAAATGATTGGTGCTCCTGCCGGTTATGTCGGTTACGAAGAGGCTGGTCAATTA
ACAGAACAAGTTCGCCGTCGTCCCTACTCATTGGTTCTCTTTGATGAAGTAGAAAAAGCACATCCAGATGTAATGAACAT
GTTCTTACAGATTCTTGATGATGGCCGTCTAACTGATGCACAAGGTCACATAGTGAGTTTCAAAGACACTGTCATTATTA
TGACTTCTAACGCTGGTTCAACAGACACAGGAAATACACCTGTGGGATTCGCCCAAGTTGATCAACAAAATCGTTTGATG
CAACGTTTGGAAAATTATTTCCGTCCAGAGTTCTTGAACCGTTTAGACGATATCATTGATTTCCAACCTTTGTCACAAGA
TCATCTACTAAAAATTGTCGACTTATTATTGACTGATATGAATGAGAACTTGTCTGACAACGATTTGCACATTGATTTAA
GCACTGCTGCTAAGCAGAAATTAGTGGAGCTCGGTTATGACCCTGCGATGGGTGCTCGACCTCTCCGTCGTGTCATGCAA
GATAAAATTGCCGATGGTATCGCCGATTTCTATTTAGAACACCCAGATGTTCATCATTTGCAAGCTGACATTGTTCATAA
TGAATTTGTTATTAGTGAAGTTAAGCCAGAACCAGTTACTGTAAATAAAATTTAA

Protein sequence :
MAQQDSFGFGNLDEMFRAMNEQMAQAQGQQNTQAQKNNNGNKKRRLLDEFGINLTKQARDGKLDPVIGRDNEVARTIEIL
NRRTKNNPVLIGEPGVGKTAIVEGLAQAIVAGKVPEKLQHKEVIRLEMSALVQGTSMRGQFEARMRELMKEVTNSDDVIL
FIDEIHEIMGAGNAEGGMDAGNILKPALARGEFQLIGATTLNEYRKIEKDGAIARRFQPVQVEEPSKEETITILEGISER
YEKYHYVTFSDSALQAAVELSDRYIPERFLPDKAIDLLDEAGSRKNLTMKVADPKTIQVNIEAADKLKQEAIDKEDFEKA
SYWRDQVNQLESQKAQVEAHPEMSKPQTVTEQDILKIVEDKTDIPVGALKENEANQLKDLDKNLSKHVIGQDEAVEKLAK
AIRRNRIGLTKSGRPIGSFLFVGPTGVGKTETAKQLAKEMFGSKDAMIRFDMSEYMEKHTVSKMIGAPAGYVGYEEAGQL
TEQVRRRPYSLVLFDEVEKAHPDVMNMFLQILDDGRLTDAQGHIVSFKDTVIIMTSNAGSTDTGNTPVGFAQVDQQNRLM
QRLENYFRPEFLNRLDDIIDFQPLSQDHLLKIVDLLLTDMNENLSDNDLHIDLSTAAKQKLVELGYDPAMGARPLRRVMQ
DKIADGIADFYLEHPDVHHLQADIVHNEFVISEVKPEPVTVNKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-158 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_0571 YP_818058.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0080 Protein 0.0 59
LEUM_0571 YP_818058.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0079 Protein 2e-158 51