Gene Information

Name : LEUM_0048 (LEUM_0048)
Accession : YP_817574.1
Strain : Leuconostoc mesenteroides ATCC 8293
Genome accession: NC_008531
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 39400 - 41451 bp
Length : 2052 bp
Strand : -
Note : -

DNA sequence :
ATGACTATGAACCATGATCACATGAATATGACAAATAAAAATACATCACATGAGCACCATGACATGTCAAGCATGAACCA
CGATCATATGGAAATGTCCAGTCATGAACACACTTCTCATGCCGGCATGGACAGTATGGATATGTCAGACATGAAACGCC
GTTTTTGGTGGGCTTTTTTCTTAATGCTTCCAATCATCATTATCACACCCTTCATGGGTATCCATTTGCCATTTACTTTT
ACTTTTCCTGGCAGTTCTTGGGTATCTGCGCTATTATCTACCCTCCTCTACTTCATTGGTTCCAAACCTTTTTGGGATGG
TGCGCGCGCTGAATTTCGTACTAAAAAGCCCGCTATGATGAGCTTAATTACCGTCGGACTGAATGTTACTTTTTGGTATT
CTATTTACGCGGTTCTATCGACGCAACTATTTCATGTTCACGTTATGGATTTCTTTTGGGAATTTGCAACACTAAATGTT
ATTATGCTTCTAGGTCACCGAATTGAGATGTCTGTGACCATGCAAGCCGGAGATGCGACGGCTAAGTTACGCGAATTAAT
GCCAAACATTGCTCATGTCAAACATAATGATATGTTGATGGATATGCCTATTGACACACTAAAATCAAACATGATTGTTC
GTGTGTTGGCTGGTGAATCTTTCCCTGCTGATGGTACCGTAGTTGAAGGTGTAAGCCAGGTTGATGAATCTTTAATGACT
GGTGAAAGTCGACTAGTCGAAAAGAAAATAGGTTCTCAAGTGGTTGGTGGTACCATTAATGGTAATGGTACGCTCGATGT
CAAATTAACGACTGTTGGGGATGATTCATTTATTGGCCAGCTAAAAGAAACCTTACTATCTTCTCAAGATAAGAAATCAC
GCGCTGAAACACTAGCAGACAAAGTCGCAGCATGGTTGTTTTGGGTGGCTCTATTATTTGCTATTGGTTCTCTACTTATT
TGGACGCCACTACGCGGACTAGGTTTTGCAGTTAATATTGCCGCAACTGTGTTAGTCATTGCCTGCCCCCATGCTTTGGG
TCTAGCAGTACCTTTGGTCATCAATCGAACAAAGGCGATTGCAGCAAAAGAAGGCATATTAATCAAAAATCGTAAAGCAC
TAGTGGCAGCAAATCATTTAAAGTTTGCTTTGATGGATAAAACTGGTACATTAACAACTGGAAAATTTACTGTACAGCAC
TTTAGTGTCTATGACTTTGATCAAAGTAAAGCACTAGGAATTATGAGCGCATTAGACCAGCAATCTACCCACCCACTTGC
GCAATCCATTGTTAACTACGCAAAAGAACAACACGCGCCAAAAATACAAGCATCACACGTAGAAAACATTGCCGGTTATG
GTGTACGTGGTAAAATAGATGATCAATTATATACACTTGCTTCGGCAAAATATCTCAAACAAAATCATATTACTTTTACG
CCACTACAAACGGAAGGCTCAATCTCTTACTTATTGGAAGAGGGACGCGTTATAGCTGCAATAGCACAGGGGGACCATCT
CAAAGAATCAGCTCCTGCCTTTATTCGCACCTTATTGAACCAAGGGATCACACCTGTTATGATTACAGGTGACAACGAAT
TGGCTGCTAAACAGATTGCTGACGAGTTAAAAATAACAGATATCCATTCACAAGTATCCCCTCAAGACAAAATCAATCTG
GTTTCAGAGTATCAACAACATGGTACGACAATGATGATTGGTGATGGTATTAATGATGCCCCAGCCTTAGCTCAAGCTAA
TTTAAGTATTGCCATCGGTGTTGGAACGGAAGTAGCGCATGCTTCCGCTGATGCTATATTAATAGCTGATCAGTTATCAA
AAATTATTGACTTTATTAATCTAGCTAAGCGTAGCAATACTAAACAAGTGCAAAACCTGTGGTGGGGAGCTAGTTACAAC
ATTATTGCTATTCCTTTAGCTGCCGGTGTGTTGGCATTTGCTGGTATAATGCTAAACCCAATGATTGCCGCATTAATTAT
GTCACTGTCCACAATCATTGTTGCAATTAATGCATTATTATTAAAGCATTAG

Protein sequence :
MTMNHDHMNMTNKNTSHEHHDMSSMNHDHMEMSSHEHTSHAGMDSMDMSDMKRRFWWAFFLMLPIIIITPFMGIHLPFTF
TFPGSSWVSALLSTLLYFIGSKPFWDGARAEFRTKKPAMMSLITVGLNVTFWYSIYAVLSTQLFHVHVMDFFWEFATLNV
IMLLGHRIEMSVTMQAGDATAKLRELMPNIAHVKHNDMLMDMPIDTLKSNMIVRVLAGESFPADGTVVEGVSQVDESLMT
GESRLVEKKIGSQVVGGTINGNGTLDVKLTTVGDDSFIGQLKETLLSSQDKKSRAETLADKVAAWLFWVALLFAIGSLLI
WTPLRGLGFAVNIAATVLVIACPHALGLAVPLVINRTKAIAAKEGILIKNRKALVAANHLKFALMDKTGTLTTGKFTVQH
FSVYDFDQSKALGIMSALDQQSTHPLAQSIVNYAKEQHAPKIQASHVENIAGYGVRGKIDDQLYTLASAKYLKQNHITFT
PLQTEGSISYLLEEGRVIAAIAQGDHLKESAPAFIRTLLNQGITPVMITGDNELAAKQIADELKITDIHSQVSPQDKINL
VSEYQQHGTTMMIGDGINDAPALAQANLSIAIGVGTEVAHASADAILIADQLSKIIDFINLAKRSNTKQVQNLWWGASYN
IIAIPLAAGVLAFAGIMLNPMIAALIMSLSTIIVAINALLLKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-106 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_0048 YP_817574.1 cation transport ATPase BAC0383 Protein 5e-117 45
LEUM_0048 YP_817574.1 cation transport ATPase BAC0079 Protein 7e-122 44
LEUM_0048 YP_817574.1 cation transport ATPase BAC0629 Protein 1e-106 41