Gene Information

Name : LEUM_1732 (LEUM_1732)
Accession : YP_819192.1
Strain : Leuconostoc mesenteroides ATCC 8293
Genome accession: NC_008531
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1701195 - 1701884 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAAGTATTGATTGTTGAAGATGAAGAAAACTTGGCAAAGTTTGTTGGTCTTGAGCTTAAACATGAAGGATATGA
AGCTGAAACGGTGAATGATGGTCGTTCTGGGCTAGATTTAGCATTAGAAAATGATTACGATGTTATTTTGCTCGATTTGA
TGTTGCCTGAACTAAACGGTTTAGAAGTTGCACGTCGATTGCGTGAAGTTAAAAAAACACCAATCATCATGATGACTGCT
CGTGATTCAGTGATTGATCGTGTTTCTGGATTGGATTATGGCGCTGATGATTATTTGGTAAAGCCATTTGCAATTGAAGA
ATTATTGGCTCGTATTCGTTCGCTTTTGCGCCGTATTGCAATTGAGACTGAAACAAACGATAAGCATCGTTCAATTATTA
ACTTCAAAGACCTCCGTATTGAAAAGGAAAATCGTATTGCACGTCGCGATGATCAAATTATTAATTTGACAAAGCGTGAA
TACGACTTGCTATTAACATTAGTAGAAAATATTAATGTGGTTCAATCTCGTGAGCAATTATTGAAAGAAGTTTGGGGTTT
TGATTCTGAAGTAGAAACGAATGTTGTTGATGTGTATATTCGTTACTTGCGTAATAAGATTGATGATCCTGAAAGTAAGG
CATCATATATCCAAACAGTACGTGGTACTGGCTACGTGATGCGCAGCTAA

Protein sequence : 
MSKVLIVEDEENLAKFVGLELKHEGYEAETVNDGRSGLDLALENDYDVILLDLMLPELNGLEVARRLREVKKTPIIMMTA
RDSVIDRVSGLDYGADDYLVKPFAIEELLARIRSLLRRIAIETETNDKHRSIINFKDLRIEKENRIARRDDQIINLTKRE
YDLLLTLVENINVVQSREQLLKEVWGFDSEVETNVVDVYIRYLRNKIDDPESKASYIQTVRGTGYVMRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_1732 YP_819192.1 DNA-binding response regulator HE999704.1.gene1528. Protein 4e-68 68
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 5e-48 55
LEUM_1732 YP_819192.1 DNA-binding response regulator AE015929.1.gene1106. Protein 4e-44 54
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_012469.1.7686381. Protein 1e-35 43
LEUM_1732 YP_819192.1 DNA-binding response regulator BAC0308 Protein 3e-31 42
LEUM_1732 YP_819192.1 DNA-binding response regulator BAC0125 Protein 5e-31 41
LEUM_1732 YP_819192.1 DNA-binding response regulator NC_012469.1.7685629. Protein 9e-37 41
LEUM_1732 YP_819192.1 DNA-binding response regulator HE999704.1.gene2815. Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_1732 YP_819192.1 DNA-binding response regulator VFG1389 Protein 4e-31 44
LEUM_1732 YP_819192.1 DNA-binding response regulator VFG1390 Protein 6e-34 43
LEUM_1732 YP_819192.1 DNA-binding response regulator VFG0596 Protein 5e-33 42