Gene Information

Name : LEUM_0150 (LEUM_0150)
Accession : YP_817673.1
Strain : Leuconostoc mesenteroides ATCC 8293
Genome accession: NC_008531
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 133404 - 135554 bp
Length : 2151 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAACAATGATTTTTTCAATGATCCATTTGGATCAGACATGAATGACATTTTTAATAACATGATGGGCAATATGAA
CGGCATGAACTCTGAGAACCGTCGTTATTTGATTAACGGTCGCGAGGTTACGCCGGAAGAGTTTGTTCAATATCGACAGA
CTGGGAAACTACCACAAGGTCTTCAAGCAGCCAATGCTACAAACGGTCAGCCAGTAGCACAACAAGCTGGGCAACCTGGA
CAAGTAAAGCAGGAAGGAATGCTGGCAAAGCTTGGACGTAACTTGACGAAAGAGGCTCGCGACGGTTTGCTTGATCCAGT
CATTGGACGTAACAAAGAGATTCAAGAAACGGCTGAAATTTTAGGACGCCGTACAAAGAACAACCCAGTGCTAGTTGGCG
ATGCTGGTGTTGGTAAGACAGCAGTGGTTGAAGGTTTGGCACAAGCGATTGTTAATGGGGATGTCCCAGCAGCAATTAAG
GACAAGGAGATTTACAGTATCGATATCTCTAGCCTTGAAGCTGGTACTCAATTCCGTGGTGCTTTTGAGGAAAATATCCA
GAACCTTTTGAAAGAAGTTAAACAAGCAGGCAACGTTATCTTGTTCTTTGATGAGATTCATCAAATCTTGGGAGCTGGTT
CAACCGGTGGCGAAGATGGCGGTAAAGGACTAGCTGATATTATCAAGCCAGCTTTGAGCCGTGGTGAAATTTCATTAATT
GGTGCGACAACGCAAGATGAATATCGTAACACGATTATGAAGAACGCTGCACTAGCTCGGCGTTTTAATGAAGTGACTGT
GAATGCACCATCACCTAAGGATACGCTTGAAATCTTGAAGGGGATTGCGAAGTTGTATGAAAAGCATCACCATGTTTCAT
TGCCTGAAAACGTATTAAAGGCAGCAGTTGACTATGCAGTACAGTATATTCCACAACGTTCATTACCAGATAAGGCGATA
GATTTGCTTGACATGACAGCGGCTCACCTGTCAGCTAAGAACCCAGTAACAGATAAGGTAAGTTTAGAGAAGCAGATGAG
CGATGCTAAAGCAAAGCAAGAAAAGGCTGTTGCTGATGAAGACTATGAGGCCGCTCTAAAGTACAAGAACCAGATTGCTG
ATTTGGAAAAGAAAGTTGGTAGCGCTGACGAAGCTAAAAAGGTTGAGGCAACGCCTAATGATGTGGCCGAATCAGTAGAA
CGTTTGACTGGTATTCCTGTGGCACAGATGGGTGCGTCAGATATCGAACGTTTGAAGACAATTGGTGATCGTTTGGCTGG
TAAAGTTATTGGTCAAGATGAAGCCGTAAGTATGGTCGCTAAAGCCATTCGTCGTAACCGCGCGGGATTTGATGAAGGAA
ACCGACCAATTGGTTCGTTCTTGTTCGTCGGTCCAACTGGTGTTGGTAAGACGGAGTTAGCAAAGCAACTAGCTTTGGAC
ATGTTTGGTAGCAAAGATAACATTGTTCGTTTGGATATGAGTGAGTATTCGGATTTGACAGCGGTATCTAAGTTAATTGG
TACGACCGCTGGGTATGTTGGCTATGATGACAATAGCAACACACTAACTGAAAAAGTTCGCCGTAATCCTTATTCAATTA
TTCTCCTTGATGAAATTGAAAAGGCCAATCCACAAGTACTAACGTTGTTATTACAAGTGATGGACGATGGTCGCTTAACA
GACGGTCAGGGAAACGTCGTTAACTTCAAGAACACGGTCATTATTGCAACATCTAACGCTGGATTTGGACACAATTCGAG
TGATGCAGATCAGGATTTGATGGCTAAGTTGGCGCCATACTTCCGTCCAGAGTTCTTGAACCGTTTTAACGGTGTGATCG
AATTTAGTACGTTGACTAAGGATGATTTGAAGCAAATTGTTGATTTGATGTTAGATGATGTCAATAAGACATTGGCTAAG
AAAGACTTGACATTACATGTGTCTGACGAAGTTAAGGATCACTTGATTGAAGATGGTTATGATGAAGCCTTAGGTGCACG
ACCATTGCGTCGAGTAATTGAGCAACAAATTCGTGACCAAGTAACGGACTTCTATTTGGATAATCCAGGTGAAAAATCCT
TAAGCGCAGACTTGGTTGATGGCAAAGTTGTCATCTCGGCTGTTGTTGAGAAGACTGCGGTTACTAACTAA

Protein sequence :
MANNDFFNDPFGSDMNDIFNNMMGNMNGMNSENRRYLINGREVTPEEFVQYRQTGKLPQGLQAANATNGQPVAQQAGQPG
QVKQEGMLAKLGRNLTKEARDGLLDPVIGRNKEIQETAEILGRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIK
DKEIYSIDISSLEAGTQFRGAFEENIQNLLKEVKQAGNVILFFDEIHQILGAGSTGGEDGGKGLADIIKPALSRGEISLI
GATTQDEYRNTIMKNAALARRFNEVTVNAPSPKDTLEILKGIAKLYEKHHHVSLPENVLKAAVDYAVQYIPQRSLPDKAI
DLLDMTAAHLSAKNPVTDKVSLEKQMSDAKAKQEKAVADEDYEAALKYKNQIADLEKKVGSADEAKKVEATPNDVAESVE
RLTGIPVAQMGASDIERLKTIGDRLAGKVIGQDEAVSMVAKAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALD
MFGSKDNIVRLDMSEYSDLTAVSKLIGTTAGYVGYDDNSNTLTEKVRRNPYSIILLDEIEKANPQVLTLLLQVMDDGRLT
DGQGNVVNFKNTVIIATSNAGFGHNSSDADQDLMAKLAPYFRPEFLNRFNGVIEFSTLTKDDLKQIVDLMLDDVNKTLAK
KDLTLHVSDEVKDHLIEDGYDEALGARPLRRVIEQQIRDQVTDFYLDNPGEKSLSADLVDGKVVISAVVEKTAVTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-133 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LEUM_0150 YP_817673.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0080 Protein 1e-151 51
LEUM_0150 YP_817673.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0079 Protein 1e-135 45