Gene Information

Name : LGAS_0884 (LGAS_0884)
Accession : YP_814711.1
Strain : Lactobacillus gasseri ATCC 33323
Genome accession: NC_008530
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 877294 - 878202 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence :
ATGAATCAGACACAGACGATGAAGGATAATTTAGAAGATTATTTACGTTTCAGTCAAGTGGAACGTGGCTTAAGCCCTAA
TACCATTATTTCTTATCGAACTGATTTAGAAGAATATTTAGATTATTTACAAGATCAAAATGAAACAAGCTGGGAAGTCG
ATTATCTAGTTGTTGACGCTTTTCTTGCTACACAAAAAGACAAGGGAAAGGCAACAACTTCAATTAGTCGGATGATCTCT
AGTTTGAGAAAGTTCTATCAATGGCTCTTAAGACAGGATATAATTGAACGTGATCCATTAGTAAAAATTGATTCCCCAAA
AAGTGAACGGAGACTGCCAACCGCTTTAAGCGAAGAAGAAGTTGATAAACTACTTGCGGCTCCTGATACGAATACACCAC
TAGGAATTAGGGATCGTGCCATGCTAGAGGTACTTTATGCAACTGGGATGCGGGTTAGTGAATTAATAAATTTACGAACT
GGTGATATTCATGCCGATTTAAAAATCATTAGGGTTCTTGGCAAAGGCTCAAAAGAACGACTTGTACCAATTACTGAAGT
CGCTTTATCATGGCTTGAGAAATATCAAACAGATGTTAGGGATGCCCAAGTATTAAAAAGTGGTCAATTTACTGATGTAA
TTTTCTTAAATAATCATGGTCATCAACTAACTAGACAGGCTGTTTGGCAGAAAATAAAAAAGTATTGTCAGCTGATTGGA
ATAACTAAAAATGTTACTCCTCATACTTTGAGACATACTTTTGCTACTCATTTACTCGAAAATGGGGCAGATTTGCGTGT
AGTTCAAGAAATTTTGGGTCATAGTGATATTACAACTACGCAGATCTATACTAATCTGACGCAGAAACATATTTTGGAGG
TTTATAATCAAGCACATCCACGTGCTTAA

Protein sequence :
MNQTQTMKDNLEDYLRFSQVERGLSPNTIISYRTDLEEYLDYLQDQNETSWEVDYLVVDAFLATQKDKGKATTSISRMIS
SLRKFYQWLLRQDIIERDPLVKIDSPKSERRLPTALSEEEVDKLLAAPDTNTPLGIRDRAMLEVLYATGMRVSELINLRT
GDIHADLKIIRVLGKGSKERLVPITEVALSWLEKYQTDVRDAQVLKSGQFTDVIFLNNHGHQLTRQAVWQKIKKYCQLIG
ITKNVTPHTLRHTFATHLLENGADLRVVQEILGHSDITTTQIYTNLTQKHILEVYNQAHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-53 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-53 44