Gene Information

Name : LGAS_0882 (LGAS_0882)
Accession : YP_814709.1
Strain : Lactobacillus gasseri ATCC 33323
Genome accession: NC_008530
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 874547 - 876316 bp
Length : 1770 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAAACTAAAATTGTTAGTACTTTAGGGCCAGCCTCAAACGATGTTGAGACTATTACTAAATTAGCTGAAGCAGG
TGCAAACGTATTCCGCTTCAACTTCTCACACGGTGACCACGAAGAACACCGTGCACGTATGAACATGGTTCGTGAGATTG
AAAAGAAGACTGGTAAACTTCTTGGCATTGCTCTTGATACTAAGGGTGCCGAAATTAGAACTACTGAACAAGAAGGCGGC
AAGTTCACTATTAACACTGGTGACACTATCCGTATTTCTATGGATGACACTAAGAAGGGTAACAAGGATATGATCCACGT
TACCTACGATGGACTTTACGATGATACTCACGTTGGCGGTCACGTATTAATCGATGATGGTTTAGTTGACCTTTTGATTA
AGGAAAAAGATGACGCTAAGAGAGAATTAGTTTGTGAAGCTCAAAACACTGGTTTAATTGGTTCTAAGAAGGGTGTTAAC
GCTCCTGGTGTTGAAATTCGCCTCCCAGGTATCACTGAAAAAGATACTAACGATATTAAGTTCGGTTTAAAGGAAGGTAT
CAACTTCATCTTTGCTTCATTCGTTCGTAAAGCACAAGATGTTCTTGACATTCGTCAATTGCTTGAAGAAGCACATTGTG
AATACGTAAAGATCTTCCCTAAGATTGAATCACAAGAAGGTATTGATAACATCGATGAAATCTTAAAGGTTTCTGATGGT
TTAATGGTTGCTCGTGGTGACATGGGTGTTGAAATTCCATTTATTAATGTTCCATTTGTACAAAAGGAATTAATTAGAAG
ATGTAACGCATTAGGTAAGCCAGTTATTACTGCTACTCAAATGCTTGACTCAATGCAAGAAAACCCACGTCCAACTCGTG
CCGAAGTTACTGACGTTGCAAACGCTGTTCTTGATGGTACTGACGCAACTATGCTTTCAGGTGAATCTGCAAACGGTCTT
TACCCAGTTAAGGCTGTTAAGGCTATGGCTGAAATCGACATGCGTACTGAAAAGCAACTTGCTAAGCGTAACAAGTTAGC
TCTTCAAAGATTTGAAGAATACAAGGGTTCAAACGTTACTGAAGCTATCGGTGAATCAGTTGTTAGAACTGCTGAAGAAT
TGGGCGTTAAGACTATTATTGCCGCAACTGAATCTGGTTACACTGCACGTATGATTTCTAAGTATCGTCCAAACGCTGAC
ATCATCGCTATGACATTCGATGAAAAGATCGAACACTCATTAGGTGTTGTTTGGGGTGTAAAGCCAATGTTGGTTGAAAA
GCCTAAGACTACTGAAGAAATGTTTGACAAGGCAGCAGAACTTGCTAAAGAAACTGGTCTTGCAAAAGACGGCGACTTAG
TAATTATCGTTGCTGGTGTTCCTTTGGGCGAAACTGGTACTACTAACTTGATGAAGTTACAATTGATCGGTACCCAACTT
GTTAAAGGTTTAGGTGTTGGTGAACAATCAGTTATTGGTAAAGCCGTAGTTGCAACTTCTGCTGAAGAAGCAAACAGCAA
AGTTCAAGATGGTGACATCTTAGTTGCTAAGACTACTGATAAGGATTACTTACCAGCAATCAAGAAGGCTTCAGGTATGG
TAGTTGAAGCTTCAGGTTTAACTAGTCACGCAGCTGTTGTTGGTCTTTCACTTGGTATCCCAGTTGTTGTTGGTGCTACT
GATGCAGTTGAAAAGATCAAGGATGGTTCTAAGATTACTGTTGATGCTCGTCGTGGTGCTGTTTACCAAGGTGAAGCAAC
TAACCTTTAA

Protein sequence :
MKKTKIVSTLGPASNDVETITKLAEAGANVFRFNFSHGDHEEHRARMNMVREIEKKTGKLLGIALDTKGAEIRTTEQEGG
KFTINTGDTIRISMDDTKKGNKDMIHVTYDGLYDDTHVGGHVLIDDGLVDLLIKEKDDAKRELVCEAQNTGLIGSKKGVN
APGVEIRLPGITEKDTNDIKFGLKEGINFIFASFVRKAQDVLDIRQLLEEAHCEYVKIFPKIESQEGIDNIDEILKVSDG
LMVARGDMGVEIPFINVPFVQKELIRRCNALGKPVITATQMLDSMQENPRPTRAEVTDVANAVLDGTDATMLSGESANGL
YPVKAVKAMAEIDMRTEKQLAKRNKLALQRFEEYKGSNVTEAIGESVVRTAEELGVKTIIAATESGYTARMISKYRPNAD
IIAMTFDEKIEHSLGVVWGVKPMLVEKPKTTEEMFDKAAELAKETGLAKDGDLVIIVAGVPLGETGTTNLMKLQLIGTQL
VKGLGVGEQSVIGKAVVATSAEEANSKVQDGDILVAKTTDKDYLPAIKKASGMVVEASGLTSHAAVVGLSLGIPVVVGAT
DAVEKIKDGSKITVDARRGAVYQGEATNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-83 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-83 47
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-83 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-83 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LGAS_0882 YP_814709.1 pyruvate kinase VFG0479 Protein 1e-83 47