Gene Information

Name : rpmF (LGAS_0877)
Accession : YP_814704.1
Strain : Lactobacillus gasseri ATCC 33323
Genome accession: NC_008530
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L32
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0333
EC number : -
Position : 868078 - 868269 bp
Length : 192 bp
Strand : +
Note : some L32 proteins have zinc finger motifs consisting of CXXC while others do not

DNA sequence :
ATGGCAGTTCCTGCAAGAAAAACTTCTAAGCAAAAGAAACGTTCACGTCGTGGTCATATTAAATTAGCCACACCAGCAAT
GCATTACGATGCTACTACTGGTGAATACCGTTTAAGCCACCGCGTTTCACCAAAGGGCTTTTACAAAGGCCGTCAAGTTG
CTAACGAAAACAAGCAACAAAATAACGATTAA

Protein sequence :
MAVPARKTSKQKKRSRRGHIKLATPAMHYDATTGEYRLSHRVSPKGFYKGRQVANENKQQNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0071 AAM75276.1 EF0071 Not tested Not named Protein 2e-05 55
rpmF NP_814315.1 50S ribosomal protein L32 Not tested Not named Protein 2e-05 55
ef0104 AAM75307.1 EF0104 Not tested Not named Protein 5e-05 55
rpmF NP_814351.1 50S ribosomal protein L32 Not tested Not named Protein 7e-05 55