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Name : LGAS_0283 (LGAS_0283) Accession : YP_814127.1 Strain : Lactobacillus gasseri ATCC 33323 Genome accession: NC_008530 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 318784 - 321300 bp Length : 2517 bp Strand : + Note : - DNA sequence : TTGTCTAAAGATTGTAGTATGATCTTAAAAGAAATAAGGCGGTGCAGAATGGAAAAATCATATAGTGATAGTGCAAAGAA TGTTCTTGAAATTGCTAAAGAGCAAGCACAAAACTTTCACCATCGAATTATTGGAACGGAGCATGTTTTGCTTGCTTTAG TAATTGAAGCTAACGGAGATGCCGGTAAGCTTTTGCGTGAAAGAAACGTAACACCAACCTTAGTGCGAGAAGAAATTGAA AGATATACTGGCTATGGTTCAAGTCCCAAAGCTACATATATGGAAATGTCACCACGCTTAAGCTTAGTTTTGAATTTTGC TAAGCAAAAATCTGATGAATTAGGCACTCCTCAAATTGAAACAAAGCATATTTTGCTGGGGTTATTAGCTAGTGACCAAA TTTTGGCAAGTTTAATTTTGAAAAATATTGGTGTAGAACCACGTGACTTAAGTCAAGATATTAATGATAGTTTCATGGAT GATTCTGGAGAAGCAAACAATATTTTTGATGTTTCTTCTGCAACTAGAACTAAAAAAGGCAAGTCACTGACACCTAATTT AGATAAAGTAAGTGTAAATTTAAATAAACGTGCACGCGAGGGTGCAATTGATCCAGTAATTGGTAGAGATAAAGAAATAA AGCGAGTAATTCAAATTTTATCTCGAAGAACTAAGAATAATCCTGTTTTAGTTGGAGAACCCGGAGTTGGTAAGACAGCA GTTGCACAAGGAATAGCTTCTGCAATTGTAAATCGTGAGGTTCCGGATAACTTAGCTAAAAAACGTGTCATGGCACTAGA TATGGGAAGTCTAATTGCTGGGACTAAATATCGCGGTGAATTTGAAGATAGAATGAAGAAAATTCTAAAAGAAATTCAAC GAGATGGTTCTGTGATTCTATTTGTTGATGAAATGCACACCTTGATTGGTGCAGGTGGAGCAGAAGGTGCCATTGATGCT TCAAATATCTTGAAGCCATCTTTAGCACGCGGTGATATTCAAATGATTGGTGCCACTACTTTTGATGAATATCAAAAGTA CATTGAAAAAGATCAAGCTTTGGCAAGACGTTTTCAACAGGTTAAAATTGGCGAACCATCAAAAGAAGAAACAGTGGATA TCTTAAAGGGATTACGTCCTAAATATGAAAAATTCCACAATGTAAAAATTGAAGATGAAGCAATTAAAGATGCAGTCGAA TTTTCAACAAGATATATTGCTAACCGCTTTTTACCTGACAAGGCAATTGACTTAATTGATGAGGCGAGTGCAGCAGTCAA GATTCAAGCAGTTGGTAAGGCTGATCCACGCTTGACTAAGTTAGATACCCAAATTAATGATGTTATTCACCAAAAAGAAG AGGCAGCTGAAAATCAAAACTTTGTACAAGCAGCTAAATTACGTGATGAAGAAAATAAGCTTACGCAAGATCGGGATAAA TTAATTGCCAGAGTAGAGAACAAGAACTCTAAAAAATCTATTGTTGATTCAAATAAAATTGCCCAGATTGTATCAGAATG GACGGGCGTACCAGTTACTCGAATGAAGAAGAGTGAAACGAAACGTTTAGCTCACCTCGAAAGTATTTTGCATGAACGCG TAATTGGACAAGATAAGGCAATTAGTGCAGTAAGTCGTGCAATTAGACGAAGTAGAAGTGGGATTAAGGATGAGAATCGT CCAATCGGTTCTTTCTTGTTCTTAGGACCTACTGGGGTCGGTAAGACTGAATTAGCAAAAGCATTGGCAGCAGCAGTCTT TGGTTCAGAAAGAAATATTATTCGTGTTGATATGTCTGAATATATGGATCAAGTAGCTACAAGCAAGTTAATTGGTTCTG CTCCTGGTTATGTAGGCTATGAAGAAGGTGGACAACTTTCAGAACGTGTAAGACGTAATCCATATTCAGTAATTCTGTTA GACGAAGTGGAAAAAGCTCATCCAGATGTTTTCAATTTATTGCTGCAAGTTTTAGATGAGGGTTTCTTAACTGATTCAAA GGGAAGAAAAGTTGATTTTAGAAATACAATCATTATTATGACTTCTAACCTTGGTTCGCGCAGCTTACAAGAAGATAAGA CAGTTGGCTTTGCGGCTGATAACGAAGATAAAAATAAACTTCAGCAAGAAAAGGTTACAGCAGCAGTTAAACAGTTCTTT AGACCAGAATTTTTGAATAGAATTGATGAAACAGTTGTCTTTGATAGTTTAACTAAGAAACAATTGCGTGAAATTGTTAG TTTAATGACTAGTCATTTGATTAGTCGCTTAGCTCGAAAAGAAGTTACTTTAAAGATTTCTCCAGCAGCTTTAGATGTGT TAGCCAAAGACGGTTTTGATCCAGAAATGGGAGCCCGTCCTTTGCGCCGTGCAATTCAACATGAACTTGAGGATGTAATT GCAGAAGATTTAATTAGTGAAAAGATTAAAGCTGGTCAAACAGTTAAAGTTGGTGCTCATCAAGGTAAATTAAAATTTAC AATTGTTGATAAAGATAAGCCTTTAGTTAAAAACTAG Protein sequence : MSKDCSMILKEIRRCRMEKSYSDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLVREEIE RYTGYGSSPKATYMEMSPRLSLVLNFAKQKSDELGTPQIETKHILLGLLASDQILASLILKNIGVEPRDLSQDINDSFMD DSGEANNIFDVSSATRTKKGKSLTPNLDKVSVNLNKRAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTA VAQGIASAIVNREVPDNLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEIQRDGSVILFVDEMHTLIGAGGAEGAIDA SNILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETVDILKGLRPKYEKFHNVKIEDEAIKDAVE FSTRYIANRFLPDKAIDLIDEASAAVKIQAVGKADPRLTKLDTQINDVIHQKEEAAENQNFVQAAKLRDEENKLTQDRDK LIARVENKNSKKSIVDSNKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISAVSRAIRRSRSGIKDENR PIGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNPYSVILL DEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFF RPEFLNRIDETVVFDSLTKKQLREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRRAIQHELEDVI AEDLISEKIKAGQTVKVGAHQGKLKFTIVDKDKPLVKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-175 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LGAS_0283 | YP_814127.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 52 |
| LGAS_0283 | YP_814127.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 2e-146 | 52 |
