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Name : rpmE2 (LGAS_0263) Accession : YP_814109.1 Strain : Lactobacillus gasseri ATCC 33323 Genome accession: NC_008530 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 type B Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 296366 - 296617 bp Length : 252 bp Strand : + Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAGAAAAGGGATTCATCCAGATTACCAAGAAGTTGTTTTCATGGACTCAGCAACTGGTGCTAAGTTCGTAGCTGGTTC TACTTTAAAGCCAGAAGAAACAATTGAATTTGAAGGTAAGACTTACCCATTAGTTCGTGTTGAAATTTCTTCAGATTCTC ACCCATTCTATACTGGCAAGCAAAAGTTTGCACAAGCAGATGGTCGTATCGAAAAATTCAACAAGAAGTACGGTATTTCT TCAAAGAACTAA Protein sequence : MRKGIHPDYQEVVFMDSATGAKFVAGSTLKPEETIEFEGKTYPLVRVEISSDSHPFYTGKQKFAQADGRIEKFNKKYGIS SKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 1e-14 | 44 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 1e-14 | 44 |
