Gene Information

Name : LGAS_0020 (LGAS_0020)
Accession : YP_813874.1
Strain : Lactobacillus gasseri ATCC 33323
Genome accession: NC_008530
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 21739 - 21951 bp
Length : 213 bp
Strand : +
Note : -

DNA sequence :
ATGATAGAAAGAATTGCCATGAACAGAGTTAAAGAATATCGAAAGCAAAAAGGCTTATCACAGATGGCATTAGCTAAAAG
GATAGATGTTGCTAGGCAAACAATAAATTTAATTGAAAATGATAAATATAATCCTTCATTAGATTTATGTTTGAAGTTAG
CGCATGAGTTAGATACAGATTTAAATACATTATTCTGGGATGGAGATGTTTAA

Protein sequence :
MIERIAMNRVKEYRKQKGLSQMALAKRIDVARQTINLIENDKYNPSLDLCLKLAHELDTDLNTLFWDGDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-11 59
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-07 49
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 9e-08 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LGAS_0020 YP_813874.1 transcriptional regulator VFG2175 Protein 4e-08 49
LGAS_0020 YP_813874.1 transcriptional regulator VFG2168 Protein 4e-08 49