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Name : LGAS_1621 (LGAS_1621) Accession : YP_815355.1 Strain : Lactobacillus gasseri ATCC 33323 Genome accession: NC_008530 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1582064 - 1583374 bp Length : 1311 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGACATAAAGGTAATTCGAGAGAATTTAGACTGGTCAAAGAAGAAATTAGCTACACGTGGAATAAAGCCAGAAGA ATTAGACAAATTAGTGGCTATTGATAAAGAAAGACGTGAGGCTTTAACTAAGAGCGAGCAATTAAAGCAAAAGCGTAATG AAGTATCCGATCAAATTGCACAAGCTAAGCGTAATAAAGAAGACGCCAGCGATGCTATTAAGACAATGCGTGAAGTCGGA AAAGAAATTAAGGATTTAGATAAAGAAGTAGAAGACCTTACTCAAAAACAAAAGTATATTTTACTTCGTTTACCTAACTT CCCAGCAGATTCAGATCCTATTGGACCAGATGAAAGCTATAACGAAGAGGTTCGTAAATGGAATGAACCAACTAAGTTTG ATTTTGAACCAAAGCCTCACTGGGAAATTGGTACTGAATTAAATATTTTAGACTGGGATACTGCTGCTAAGGTTTCAGGC GCCCGTTTTGTTTACTATAAAGGTGCTGGTGCCTTACTTGAGCGTGCAGTTTCAAATTTCTTCTTAGATGAAAATACTAA AGATGGTTATACTGAAGTGATCCCACCATACTTGGTAAATGATGCTTCTATGCAAGGAACTGGTCAATTCCCTAAATTCA CTGAAGATGTTTATACAATTGTTGATAATGATGATCCTGATAAGCCACGTGATTTAACTTTAATTCCAACTGCAGAAGTT CCATTAGTTAACTACTTCCGTGGCAAGATTTTAGATGCAAAGCAATTACCAATTAATGTTACTGCATTCTCTCCAGCGTT TAGAAGTGAAGCGGGATCTGCAGGACGTGACACTCGTGGATTGATTAGAATGCACGAATTTAGAAAAGTTGAAATGGTAA AAATTGTTGATGAAGACAGTTCATGGGATGAATTGGAAAAATTAACGCATAATGCTGAACATTTACTTCAAAAGCTCGGC TTACCATATCATGTTGTTGCCCTTTCAACTGGGGATGCAAGTTTTACTAGTGCTAAAACTTATGACCTTGAAGTATGGAT GCCAGCTCAAGATAAATATCGTGAAATTTCAAGCTGTTCAAACTGTACAGATTTCCAAGCTCGTCGTAGCTTAATTCGTT ATCGTGATGAAAATGGTAAGCTTCATTTAGCTCATACTTTGAATGGATCAGGTCTAGCTGTAGGTAGAACTGTAGCAGCT ATTTTAGAAAATTACCAAAATGAAGATGGAACTGTAAACGTACCCGAAGCATTACAACCATACATGCATGGTATGAAAGT AATTACTAAAGAACCAAAATTTGGTGAATAA Protein sequence : MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIAQAKRNKEDASDAIKTMREVG KEIKDLDKEVEDLTQKQKYILLRLPNFPADSDPIGPDESYNEEVRKWNEPTKFDFEPKPHWEIGTELNILDWDTAAKVSG ARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPTAEV PLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEDSSWDELEKLTHNAEHLLQKLG LPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREISSCSNCTDFQARRSLIRYRDENGKLHLAHTLNGSGLAVGRTVAA ILENYQNEDGTVNVPEALQPYMHGMKVITKEPKFGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-127 | 63 |
