Gene Information

Name : LGAS_1495 (LGAS_1495)
Accession : YP_815289.1
Strain : Lactobacillus gasseri ATCC 33323
Genome accession: NC_008530
Putative virulence/resistance : Virulence
Product : ABC-type multidrug transport system, ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1487286 - 1487990 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence :
ATGACTGATATTTTAACCACCAAAGAATTAGGAAAAAACTTCAAAAATAAACATGTTTTGAGCCAGATTAATATTCATGT
TCCTGAAGGGAAAATTTACTGCATCATGGGACCGAATGGGGCTGGTAAGTCAACTCTTTTGAAAATGATTAGTGGAATTG
AGAAGCCAACTGAAGGCGACATTAATTTTAAGGGTGAAAACTGGAAGCGAGAAGATTTAAAAACTATTGGTTCATTAATC
GAAGAGCCGGGCTTATTTGATAATTTAACTGTTGAAGATAATATCAAATTGAAATTAAAACTTCATCATGTTGAAAATAA
GGATCAAGAACAAATTTTGAACACGTTAGGTTTTGGCGATCATAATCAAGAAAAGGTTAAAGGATTTTCAACAGGGATGC
GCCAACGTCTAGGAATTGCGCTCGCTTTTATGGGAAACCCAGACTTAGTGGTTTTAGATGAACCAACAAATGGCCTTGAT
ACATTTGGAATTCATGAATTGCGTGAATTATTAATGTTAGAGAAAAAGCAAGGAAAGACAATTATTATTGCTAGTCACAT
GCTTTCTGAAATTCAAAAAGTCGCTGATCGTATTGCTATCTTAGGTAATGGTGAGCTTTTGCTGGAAGAAGATTATGACC
AAAAGACAGATTTGGAAGATTTATTTATTTCAACTCTAGAAAAGGCAGGCATAAAGCATGACTAA

Protein sequence :
MTDILTTKELGKNFKNKHVLSQINIHVPEGKIYCIMGPNGAGKSTLLKMISGIEKPTEGDINFKGENWKREDLKTIGSLI
EEPGLFDNLTVEDNIKLKLKLHHVENKDQEQILNTLGFGDHNQEKVKGFSTGMRQRLGIALAFMGNPDLVVLDEPTNGLD
TFGIHELRELLMLEKKQGKTIIIASHMLSEIQKVADRIAILGNGELLLEEDYDQKTDLEDLFISTLEKAGIKHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 8e-35 45
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 8e-35 45
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 8e-35 45
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 9e-35 45
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-39 43
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 3e-36 42