Gene Information

Name : LBUL_0872 (LBUL_0872)
Accession : YP_812892.1
Strain : Lactobacillus delbrueckii ATCC BAA-365
Genome accession: NC_008529
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 810772 - 811449 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGAAATTTGGTGCGTGGAAGACGACGAAAGCATCCGCGAAATCGAAATGTACACGCTGGAATCAATGAACTTCAA
GGTCCGCGGCTTTGAAGACGGACAATCTTTTTTCAAGGCCCTGGACAATAGCCGGCCGGATTTAGTGATTTTGGACTTGA
TGCTGCCTGATGAAGACGGCAGCGAAATTCTCCACCGGCTCAGGTCTACTTCCGCGACCGAAGACTTGCCGGTGATTATC
GCCAGTGCTAAGACGGCAGAATATGACAAGGTCAAGAACCTGGATTCCGGGGCGGATGACTACTTAACCAAGCCATTTGG
AATGATGGAAATGGTTTCCCGGGTCAAGGCTGTTTTGCGCCGGACCAACCGCAAGAAGGAGGACAAGATCGAAAAAGACG
GGATCAAGATTCTCTTGAAACGGCATGAAGTTTTCGAAAACGGCCATCAGGTCGATTTGACTTTGAAAGAATACGGACTC
CTGAAGCTCTTGATTACTCATCCGGGAACTGTCTTTTCCCGGGAAGAAATCATGGATCAGATCTGGGAGACTGGTTTTTA
CGGGGAAACGCGCACAGTAGACGTTCACGTGAGAACCTTGAGACAGAAGTTGGGTGAGGCTGGTAAGCATATCGAAACGG
TGCGCGGGGTCGGTTATCGCTACCATGAAGCAGACTAA

Protein sequence : 
MTEIWCVEDDESIREIEMYTLESMNFKVRGFEDGQSFFKALDNSRPDLVILDLMLPDEDGSEILHRLRSTSATEDLPVII
ASAKTAEYDKVKNLDSGADDYLTKPFGMMEMVSRVKAVLRRTNRKKEDKIEKDGIKILLKRHEVFENGHQVDLTLKEYGL
LKLLITHPGTVFSREEIMDQIWETGFYGETRTVDVHVRTLRQKLGEAGKHIETVRGVGYRYHEAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-19 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBUL_0872 YP_812892.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-19 43
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 2e-23 41
LBUL_0872 YP_812892.1 DNA-binding response regulator BAC0197 Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBUL_0872 YP_812892.1 DNA-binding response regulator VFG1563 Protein 4e-19 41
LBUL_0872 YP_812892.1 DNA-binding response regulator VFG1702 Protein 1e-18 41