Gene Information

Name : LBUL_1944 (LBUL_1944)
Accession : YP_813778.1
Strain : Lactobacillus delbrueckii ATCC BAA-365
Genome accession: NC_008529
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1766613 - 1768703 bp
Length : 2091 bp
Strand : +
Note : -

DNA sequence :
ATGGATTACAACAACTTTAACGATATGGATGATCTTTTTAGAGAATTAATGAACGGCTTGGGCGGCTTCAATTCCGAAAA
CCGCCGCTACTTGATCAACGGCCGGCAGGTAACCCCGGAAGAATTCGCTGAATACCAGAAGACTGGCCAGCTGCCAGGAC
ATGGCCAGGCCAAGAATTTCCAGGGCAAGCAAAAGAAGGCCAACGGCATTTTGGAAAAGTTAGGCCGGAACCTGACCGCT
GAAGCCCGGGAAGGCAAGCTCGACCCGGTCATCGGCCGGAACAAGGAAATCCAGGAAACGGCGGAAATCCTCTCCCGCCG
GATCAAGAACAACCCAGTCCTGGTCGGGGACGCCGGGGTCGGCAAGACCGCGGTCGTTGAAGGCTTAGCCCAGGCAATTG
TCCACGGGGACGTGCCGGAAGCAATCAAGAACAAGGAAATTATTTCCATCGACATCTCCAGCCTGGAAGCCGGGACCCAG
TACCGGGGCTCATTTGAGCAGAACATCCAGGACCTGGTCAAGGAAGTCAAGGACAGAGGCAATGTCATCCTCTTCTTTGA
CGAAATCCACCAGATCCTCGGTGCCGGCGGCATGGGCGACGGTAATGGTTCCAAGGGGATGAGCGACATCTTGAAGCCGG
CTTTGTCCAGAGGTGAAATCACCGTAATCGGGGCCACCACCCAGGATGAATACCGGAACACCATCATGAAGGACGCCGCT
TTGGCCCGCCGCTTCAACGAAGTAACTGTCAACGCTCCGAGTCAAGCTGACACCTTCAAGATCTTGATGGGGATCCGGTC
CTTATACGAAAAGCACCACAATGTGGAACTGCCAGACGACGTCTTGAAGGCCGCCATCGACTACTCAGTCCAGTACATTC
CGCAGCGGTCCCTGCCTGACAAGGCCATCGACCTTTTGGACATGACCGCCGCTCACCTGGCTGCCCAGCACCCGGTGACT
GACGCCAAGACCATCGAAAAGCAGATCAAGGAAGAAAAGCAGGCTCAGAAAAAGGCCGCTGAAAATGAAGACTACCAAGC
CGCCCTTGACCACAAGACCAAGGCTGAAAAGCTGGAAAAGCAGCTGAGTGAAAACCACGAGGAAAGAAAGACCGTGGCTA
CCCCGGCTGACGTGGCCGCTGCCGTTGAACGCCTGACCGGGATTCCGGTTTCCAAGATGGGCGCCAGCGACATCGAACGC
TTGAAGGGGCTCAGCAGCCGCTTAAAGGGCAAGATCATCGGCCAGGATGAAGCCGTTGAAGCAGTAGCCAAGGCTATCCG
CCGCAACCGGGCTGGCTTTGACGAAGGCAACCGGCCAATCGGCTCCTTCCTCTTCGTCGGCCCGACCGGGGTCGGCAAGA
CGGAACTGGCCAAGCAGCTGGCCTTGGACATGTTTGGCTCTAAGGATGCCATCATCCGCCTGGACATGTCTGAATACTCC
GACCGGACAGCCGTTTCCAAGCTGATCGGGACCACGGCCGGCTACGTGGGCTACGATGACAACTCCAACACCTTGACGGA
AAAGGTCCGCCGCAACCCTTACTCAATCATCCTTTTGGACGAAATTGAAAAGGCTGACCCGCAGGTCATCACCCTGCTCT
TGCAAGTGCTTGACGACGGCCGCTTAACTGATGGGCAAGGCAACACGGTCAACTTCAAGAACACCATCATTATCGCTACC
TCTAACGCCGGTTTCGGCAATGAACAGCTGATGGGCGACGCTAAGAAGGACGAAAAGCTGATGGACCGGTTAGCTCCTTA
CTTCAGACCGGAATTCCTCAACCGCTTCAACGCGGTCATCGAATTCAGCCACCTGACCAAGGAAGACTTGAAGGAAATCG
TTAACTTGATGCTAGCTGACGTAAACAAGACTCTGGCCAAGAAGGGCATCAGCTTGACTGTCAGTGAAAGCGCCAAGGAC
TACTTGATTGAACAAGGCTACGACGAAGCTATGGGGGCACGGCCGCTGAGAAGAGTCATCGAACAGGAAATCCGTGACAA
AGTAACTGATTACTACCTGGACCACCTGGACGTCAAGAAACTGAAGGCGGACATGGTCGACGGGGCCCTGGTTATCAGTG
AAGATAAATAA

Protein sequence :
MDYNNFNDMDDLFRELMNGLGGFNSENRRYLINGRQVTPEEFAEYQKTGQLPGHGQAKNFQGKQKKANGILEKLGRNLTA
EAREGKLDPVIGRNKEIQETAEILSRRIKNNPVLVGDAGVGKTAVVEGLAQAIVHGDVPEAIKNKEIISIDISSLEAGTQ
YRGSFEQNIQDLVKEVKDRGNVILFFDEIHQILGAGGMGDGNGSKGMSDILKPALSRGEITVIGATTQDEYRNTIMKDAA
LARRFNEVTVNAPSQADTFKILMGIRSLYEKHHNVELPDDVLKAAIDYSVQYIPQRSLPDKAIDLLDMTAAHLAAQHPVT
DAKTIEKQIKEEKQAQKKAAENEDYQAALDHKTKAEKLEKQLSENHEERKTVATPADVAAAVERLTGIPVSKMGASDIER
LKGLSSRLKGKIIGQDEAVEAVAKAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIRLDMSEYS
DRTAVSKLIGTTAGYVGYDDNSNTLTEKVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTIIIAT
SNAGFGNEQLMGDAKKDEKLMDRLAPYFRPEFLNRFNAVIEFSHLTKEDLKEIVNLMLADVNKTLAKKGISLTVSESAKD
YLIEQGYDEAMGARPLRRVIEQEIRDKVTDYYLDHLDVKKLKADMVDGALVISEDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-127 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBUL_1944 YP_813778.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0080 Protein 1e-141 49
LBUL_1944 YP_813778.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0079 Protein 5e-132 45