|
Name : rplS (LBUL_1273) Accession : YP_813237.1 Strain : Lactobacillus delbrueckii ATCC BAA-365 Genome accession: NC_008529 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1191569 - 1191916 bp Length : 348 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGATCCATTAATTCAAGAATTGACTAAAGAACAACTTCGTGACGACATGCCTGAATTCCGTGCCGGGGACACTGTTCG TGTTCACGTACGTGTTGTTGAAGGTACTCACGAACGTATCCAGATCTTCGAAGGTGTCGTAATCAAGAAGAGGGGCACTG GCATCGGTGCTACTTACACTGTTCGTAAGATTGCTTCCGGCGTTGGCGTTGAACGGACTTTCCCAGTTAACACTCCACGT GTTGCCAAGGTTGAAGTTATCCGTCACGGCCGCGTACGTCGTGCTAAGCTTTACTACTTGCGGACTCGTAGCGGTAAGGC TGCTCGTATCACAGAACGTCGTCGTTAA Protein sequence : MDPLIQELTKEQLRDDMPEFRAGDTVRVHVRVVEGTHERIQIFEGVVIKKRGTGIGATYTVRKIASGVGVERTFPVNTPR VAKVEVIRHGRVRRAKLYYLRTRSGKAARITERRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-37 | 72 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 1e-27 | 53 |
