Gene Information

Name : OEOE_0572 (OEOE_0572)
Accession : YP_810181.1
Strain : Oenococcus oeni PSU-1
Genome accession: NC_008528
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 548377 - 550539 bp
Length : 2163 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAATAATGATTATTTTAATAACAGTAATAATGATCCATTCAACTCGATGGATGACATATTCAATAATTTAATGGG
ACGAATGAACGGAATTAATTCCGAATCCCGTTATCTAATCAATGGACAGGAAGTAAGCCCGGAAGAGTTTGCTGCTTACC
GTCAAAGTGGCAAAATGCCGATTAACGGTCAATTTCAGGAAGTTGGGTCACAGGCTCAGCCCGGGCAGCTTGGGACGGCT
GTTTCTCAAAAAAATGGTCAATCAAAGAAAACGGGTATTTTGGAAAAACTCGGCCGTAATTTGACCGAGGAAGCGCGACA
AGGCAAACTAGATCCGGTAATCGGCAGGAACAAGGAAATTCAGGAGACTGCAGAGATTTTAAGCCGACGGACAAAGAACA
ACCCGGTTCTAGTTGGCGACGCTGGAGTCGGGAAAACGGCTGTTGTCGAAGGACTGGCTCAGGCGATTATCAATGGAAAT
GTTCCGGCAGCAATTAAAGGCAAAGAAATATATTCTATCGATATTTCTGCTCTTGAAGCAGGAACTCAGTATCGTGGAAG
TTTTGAAGAAAATATTCAAAAATTAATTAGTGAAGTAAAAAGTGCCGGCAACGTGATCCTTTTCTTTGATGAAATTCATC
AAATATTAGGAGCCGGCAACACCGGAGAAGAGTCCGGATCTAATGGAATGGCTGATATCTTAAAACCGGCTTTAAGCCGA
GGCGAGGTTTCTGTGATCGGAGCCACGACTCAAGACGAGTATCGGAATACGATTATGAAGAATGCTGCTTTGGCGCGTCG
CTTTAACGAAGTAACTGTTAACGCGCCAAGCCCGGAAGATACATTGGCAATTCTAAAAGGTGTCCGTTCGCTTTATGAAA
AACACCATCATGTTAAGTTTCCCGACGATGCCTTAAAAGCGGCTGTTGATTATTCAGTTCAGTATATTCCACAAAGGTCC
TTACCGGATAAAGCGATTGATTTGGTGGACATGACAGCCGCTCACTTATCGGCTCAACACCCGGTGACAGACAAAGTCAG
TTTGGAAAATGATTTGAAAAATGCCAAAACCGAACAGGACCAGTCTGCGGCAAAGGAAGATTTCGAGAAAGCTGCCGCTG
CCAAAAAGCGGGTCGAAGAGCTTGAAGATAAGTTAAAAAACGTTTCCAGCGAAAATAAAAAAGAAGAAGTTGTTGTTAAA
CCGAATGATATTGCTCAATCGGTCGAGCGTTTAACCGGTATTCCTGTTGCCAAAATGGGTGCGAATGATATTGAGCGCTT
AAAGGGGATCGCCGGTCGTTTAAAGGGCAAGGTAATTGGCCAAAACGAGGCCGTTGAAGCAGTTGCACGAGCTGTTCGCC
GTAATCGGGCCGGCTTTGACGAAGGGAATCGCCCGATTGGAAGTTTTCTATTTGTTGGACCGACTGGAGTAGGAAAAACC
GAATTGGCCAAACAATTGGCTTTGGATATGTTCGGTTCCAAAGATGCGATTATTCGTCTGGATATGTCCGAGTATTCCGA
TTTAACTGCTAGTTCTAAGCTTATCGGTACATCGGCTGGATATGTCGGTTACAACGATAATCAAAATACGCTTACAGAAA
AAGTCCGGCGCAATCCTTATTCGATTGTTTTACTTGATGAAATCGAAAAAGCTAATCCACAAATCATCACTCTATTGCTT
CAAGTTCTGGATGATGGCCGTTTGACAGATGGTCAAGGCAATGTTGTCAACTTTAAGAACACAGTTGTGATCGCTACTTC
AAATGCTGGTTTTGGAAATGAATCGGATAATAAAAAAGACCAAGACAAGTCGATTATTGAACGTTTGGAGCCCTACTTCC
GGCCGGAGTTCTTGAATCGTTTTAATGCCATTGTTGAATTTAGCCACTTGAGCAAAGAAAATCTAAAACAAATTGTTGAA
TTAATGCTTACGGAAGTTAATCAAACGTTGGCAAAGAAAGGCATCAAGCTGGAAGTCACCCAAGCGGCCAAAGATTATTT
GATGAATCAAGGATACGATGAAGCGATGGGCGCTCGTCCTTTGCGAAGGGTGATCGAACAGCAGATTCGTGATAAAGTTA
CTGATTTCTATCTCGATAATCTTAACGCCAAGAATCTCAAAGCAGATATCGATAATGGAACAATTAAGATCACTGGAAAG
TGA

Protein sequence :
MANNDYFNNSNNDPFNSMDDIFNNLMGRMNGINSESRYLINGQEVSPEEFAAYRQSGKMPINGQFQEVGSQAQPGQLGTA
VSQKNGQSKKTGILEKLGRNLTEEARQGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIINGN
VPAAIKGKEIYSIDISALEAGTQYRGSFEENIQKLISEVKSAGNVILFFDEIHQILGAGNTGEESGSNGMADILKPALSR
GEVSVIGATTQDEYRNTIMKNAALARRFNEVTVNAPSPEDTLAILKGVRSLYEKHHHVKFPDDALKAAVDYSVQYIPQRS
LPDKAIDLVDMTAAHLSAQHPVTDKVSLENDLKNAKTEQDQSAAKEDFEKAAAAKKRVEELEDKLKNVSSENKKEEVVVK
PNDIAQSVERLTGIPVAKMGANDIERLKGIAGRLKGKVIGQNEAVEAVARAVRRNRAGFDEGNRPIGSFLFVGPTGVGKT
ELAKQLALDMFGSKDAIIRLDMSEYSDLTASSKLIGTSAGYVGYNDNQNTLTEKVRRNPYSIVLLDEIEKANPQIITLLL
QVLDDGRLTDGQGNVVNFKNTVVIATSNAGFGNESDNKKDQDKSIIERLEPYFRPEFLNRFNAIVEFSHLSKENLKQIVE
LMLTEVNQTLAKKGIKLEVTQAAKDYLMNQGYDEAMGARPLRRVIEQQIRDKVTDFYLDNLNAKNLKADIDNGTIKITGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-125 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OEOE_0572 YP_810181.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0079 Protein 3e-129 46
OEOE_0572 YP_810181.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0080 Protein 1e-138 45