|
Name : OEOE_0514 (OEOE_0514) Accession : YP_810129.1 Strain : Oenococcus oeni PSU-1 Genome accession: NC_008528 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 497321 - 499792 bp Length : 2472 bp Strand : + Note : - DNA sequence : ATGGATAATCAATACACAGCATCTGCAAAAAATGTTTTACTTTTAGCCCAGGAACAGGCGAAGTATTTTAAACATGAAAT CGTTGGTTCGGAACATTTGCTGTCGGCTCTTACTTTGGAAAAAGATGGGTTGGCGAGCAAGGTTCTTCAAGATTACAATG TCACCGACGATGATATTAGAAATGAAATTGAACAATTTACCGGATATGGAACTCATACAAATATAAAAGCCGGCTTTTTG GCTTATTCTCCAAAGGCTCAGGAAATTTTAAAGAATGCAGCATTGCAGGCCCAAAGTCTTGGCGCCCGTCAAATTGGAAC CGAACACCTCCTTTTGGCTTTATTGACTGATGAATCGATTCTTAGCTCGCGGATTTTGGCTAGTTTGGACGTCCGTTTGC AGGATTTGACTCGTGCGATTTTTAAGCGGATTGGTGTCGATCCAAATCAGCAAAAACCGAAATCCAAGCAGCAGGGACAG GCTAATCAACAGGGAACGCCGACTTTGGATTCGATGTCGCGTGATTTAACGGCTTTGGCGTCAGCTGGCCAAATTGATCC AGTTGTCGGTCGGGATCAGGAAGTTCATCGGGTAATTCAGATTTTGAGCCGTCGAACGAAAAATAATCCGGTTTTGATTG GCGAACCAGGTGTCGGCAAGACGGCAATTGCCGAAGGTCTGGCACACAAAATTGCCACTGGTCAAGTTCCTTTTGATCTG GCGAATAAACGTTTGATGGCCCTTGACATGGGCGCCTTAATCGCTGGTACCAAGTATCGTGGCGAATTCGAAGACCGCTT AAAGAAAATTATCAACGAAATTCATCAGGATGGTCAAGTGATTCTTTTCATTGATGAATTGCATACTTTAATTGGCGCTG GTGGGGCCGAAGGAGCACTGGATGCCTCCAACCTTTTAAAGCCTGCTTTGGCTCGTGGAGAATTGCAAACAATCGGTGCA ACTACTTTTGATGAATATCAGAAGTACATTGAATCCGATCAAGCGCTTGAACGTCGTTTCGCAAGCGTAACAATCGATGA ACCAAGTCAGGAAGATTCGGTTGAAATTTTAAAGGGTTTGCGACCGCGTTATGAGGAACATCATCGCGTTAATATCTCCG ATGAGGCAATCAATGCAGCTGTTAAATTAAGTTCACGTTATATTGCGGACCGTTTTCTTCCCGACAAGGCGATTGATTTA ATGGATGAGGCGGCTGCGAAGGTTCGAATCGATACAGTCCAACCAGAGGATAAAAAGGTTGATTTAGAAAGACAGCTGAA TGGTTTACGTGATCAATTGGATGATGCTGTTTCTTCTGGCGATTTCGATCAAGCAACCAAGATTCGCCAGCAAGAAATCA AAATAAGAAAAGAATTAGCAGTTGTTGAGACCGACAATTTGATTAATGGCACAAAAGATCATAAATATCAGTTAACGGTC CGGGAAAAGGATATTACCGATGTTGTCGGACAACAGACTGGTATTCCTGTGACGCAATTACAAAAATCAGAATCCGAGCG GCTTCTGCATCTGGAGGAAATACTTCACCGTCGGGTCATCGGACAAAATGAAGCAATTTCGGCTGTTTCTCGGGCTATTC GTAGAGCCCGCTCGGGTATCAAAGATCCAAGCCGTCCGATTGGGACCTTTCTTTTTCTTGGTCCGACTGGTGTTGGTAAG ACTGAATTGGCTAAGGCTTTGGCCGAGGCAATGTTTGATTCGGAAGATAATATGATTCGAGTCGATATGTCCGAATATCA GGAATCATATTCTGCTTCGCGATTAATCGGATCCGCGCCTGGCTATGTTGGCTATGATGAAGGCGGCCAGCTAACCGAAC GTGTGCGCAATCATCCTTACTCGGTTGTTTTATTGGATGAAGCCGAAAAGGCTCATCCGGATATCTTTAATCTTTTATTG CAGGTTTTCGATGATGGCTATATGACTGATTCAAAGGGTCGTAAAGTTGATTTTAGAAATACGATTATTATCATGACATC GAACCTTGGAGCAACTCGAATTCGCGATAACAAACATGTTGGTTTTGGTGCAATCGAGCCCCAAGACAGTTACAAAGCAA TGTCCAGCGAAATTCAAACAGCTTTAAAGGAACGTTTTCGTCCAGAATTTATCAACCGAATCGACGAGACGATTATTTTC CATTCTTTGAGCAAACCTGAACTTCACAAAATTGTCGAGTTAATGAGTCATGGAATTTTGCAACGTGTTGCTGAACAAGG GGTCTCGATCAAGATGAATAAAGCGGCTATTGATTTGGTTGCTCAAGTCGGATTTGATCCTGAATATGGAGCTCGTCCAA TTCGGCGAGCTTTTCAAAACCAGGTTGAAGATAAAGTTTCGGATGCTTTGCTATCCAAGGATATTCGACCAGGCGATTCC GTGACAGTTGGTTCGCGAAAAGGCAAAATCGATCTAATGATTCATCACCAAATTGAAAAAAGTACAAAATAA Protein sequence : MDNQYTASAKNVLLLAQEQAKYFKHEIVGSEHLLSALTLEKDGLASKVLQDYNVTDDDIRNEIEQFTGYGTHTNIKAGFL AYSPKAQEILKNAALQAQSLGARQIGTEHLLLALLTDESILSSRILASLDVRLQDLTRAIFKRIGVDPNQQKPKSKQQGQ ANQQGTPTLDSMSRDLTALASAGQIDPVVGRDQEVHRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAHKIATGQVPFDL ANKRLMALDMGALIAGTKYRGEFEDRLKKIINEIHQDGQVILFIDELHTLIGAGGAEGALDASNLLKPALARGELQTIGA TTFDEYQKYIESDQALERRFASVTIDEPSQEDSVEILKGLRPRYEEHHRVNISDEAINAAVKLSSRYIADRFLPDKAIDL MDEAAAKVRIDTVQPEDKKVDLERQLNGLRDQLDDAVSSGDFDQATKIRQQEIKIRKELAVVETDNLINGTKDHKYQLTV REKDITDVVGQQTGIPVTQLQKSESERLLHLEEILHRRVIGQNEAISAVSRAIRRARSGIKDPSRPIGTFLFLGPTGVGK TELAKALAEAMFDSEDNMIRVDMSEYQESYSASRLIGSAPGYVGYDEGGQLTERVRNHPYSVVLLDEAEKAHPDIFNLLL QVFDDGYMTDSKGRKVDFRNTIIIMTSNLGATRIRDNKHVGFGAIEPQDSYKAMSSEIQTALKERFRPEFINRIDETIIF HSLSKPELHKIVELMSHGILQRVAEQGVSIKMNKAAIDLVAQVGFDPEYGARPIRRAFQNQVEDKVSDALLSKDIRPGDS VTVGSRKGKIDLMIHHQIEKSTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-173 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| OEOE_0514 | YP_810129.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 53 |
| OEOE_0514 | YP_810129.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 5e-143 | 46 |
