Gene Information

Name : OEOE_0105 (OEOE_0105)
Accession : YP_809765.1
Strain : Oenococcus oeni PSU-1
Genome accession: NC_008528
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 97963 - 98676 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAAATTCTTGTTGTCGACGATGAGAAGCCAATTTCAGACGTTATCAAATTTAATTTACAAAAAGAAGGTTACGA
TGTCGTGACAGCTTTTGACGGGCGGGAAGCTTTGGAAGTTTTTGCTTCCGAGAATCCAGACCTTGTTTTGCTGGACCAAA
TGCTTCCGGAAATCGAGGGAACTGAGGTTCTTCGTCAAATTCGTTCCAACTCTTCGACGCCGGTAATTATTGTAACGGCA
AAAGACAGTGAGATCGATAAAGTTGTCGGCCTTGAAATGGGCGCTGATGATTATGTGACCAAACCTTTTTCAAATCGTGA
ATTAGTTGCTCGTGTTAAGGCTAATTTACGTCGCCAGGATGCGACTCTGCCTGGTGTTGACGCATCTGGCGATCATTCGC
AAAAGGAGATTAAAGTTGCCGATTTGATCATTCGACCGGATGCCTATACGGTTACTAAAAACGGAATTGATCTCGATTTA
ACTCATCGTGAGTTTGACCTTCTTCATTATCTGGCCCGCCGTCCCGGACAAGTGCTGACTCGTGAGGCCCTCTTGACCGA
GGTATGGGGCTTTGATTACTTTGGCGATGTTCGGACGGTCGATGTGACTGTTCGCCGTTTGCGCGAAAAAGTTGAGGACT
CGCCCAGCCGTCCTGAAATTTTAATGACTAAACGCGGTGTTGGTTATTTCATTAAACCAGATAGTGTTCATTAA

Protein sequence :
MSKILVVDDEKPISDVIKFNLQKEGYDVVTAFDGREALEVFASENPDLVLLDQMLPEIEGTEVLRQIRSNSSTPVIIVTA
KDSEIDKVVGLEMGADDYVTKPFSNRELVARVKANLRRQDATLPGVDASGDHSQKEIKVADLIIRPDAYTVTKNGIDLDL
THREFDLLHYLARRPGQVLTREALLTEVWGFDYFGDVRTVDVTVRRLREKVEDSPSRPEILMTKRGVGYFIKPDSVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-33 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-34 43
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 8e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_012469.1.7685629. Protein 4e-67 65
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 5e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 3e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 5e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 4e-48 49
OEOE_0105 YP_809765.1 DNA-binding response regulator HE999704.1.gene2815. Protein 1e-46 48
OEOE_0105 YP_809765.1 DNA-binding response regulator AE000516.2.gene3505. Protein 7e-34 47
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_012469.1.7686381. Protein 6e-39 45
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 1e-34 44
OEOE_0105 YP_809765.1 DNA-binding response regulator AE015929.1.gene1106. Protein 2e-28 44
OEOE_0105 YP_809765.1 DNA-binding response regulator CP001138.1.gene4273. Protein 7e-28 44
OEOE_0105 YP_809765.1 DNA-binding response regulator AE016830.1.gene1681. Protein 4e-41 43
OEOE_0105 YP_809765.1 DNA-binding response regulator CP000647.1.gene4257. Protein 3e-27 43
OEOE_0105 YP_809765.1 DNA-binding response regulator NC_002695.1.915041.p Protein 2e-28 43
OEOE_0105 YP_809765.1 DNA-binding response regulator CP004022.1.gene3215. Protein 4e-31 43
OEOE_0105 YP_809765.1 DNA-binding response regulator BAC0533 Protein 3e-27 43
OEOE_0105 YP_809765.1 DNA-binding response regulator CP000034.1.gene3834. Protein 2e-28 43
OEOE_0105 YP_809765.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 5e-38 42
OEOE_0105 YP_809765.1 DNA-binding response regulator AF162694.1.orf4.gene Protein 3e-35 41
OEOE_0105 YP_809765.1 DNA-binding response regulator AM180355.1.gene1830. Protein 2e-35 41
OEOE_0105 YP_809765.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OEOE_0105 YP_809765.1 DNA-binding response regulator VFG1563 Protein 5e-34 43
OEOE_0105 YP_809765.1 DNA-binding response regulator VFG1702 Protein 2e-34 43
OEOE_0105 YP_809765.1 DNA-binding response regulator VFG1389 Protein 1e-27 42