Gene Information

Name : LACR_0898 (LACR_0898)
Accession : YP_808869.1
Strain : Lactococcus lactis SK11
Genome accession: NC_008527
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 841413 - 842117 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
TTGAACCTTTTTAATGTTTTTTGCTATACTATGAGTATGAAACGACAAATACTAATTATTGAAGATGAAGAAAGTATTTC
AAATTTATTGGAAACTGAGCTTTCGTTTGAAGGATATAATGTTTTCTCGGCAGCAGATGGAATGTCTGGGCTAAAAATTT
TTGAAGAAAAACAAGAATACTTAGATGTAGTTTTGCTTGACTGGATGATTCCTAAACTTGACGGCTTAGAAGTCTTACGG
CGAATGAAAAAAATGACTAATAAAGTTCCAGTCATTTTCGTAACTGCCCGTGACTATGTAGGGGATAAGGTTGCTGGTCT
AGATGCTGGAGCAGATGATTATTTAACAAAACCTTTCAATATTGAGGAACTCATGGCCCGTTTACGTGTAATTTTTAGAA
AAAATACTCAACCGGCTATTTATTCCTACGGAACGGTTTCTCTTAATCCTGGTGAACATACAGTTGAATATCAGGAAAAA
GCAACAAGTTTAACTCAAAGAGAGTTTGCTTTACTCCTTTTCTTATTTGAACATCAAGGAGAAATCATCTCGAGAGATGA
CATATTAGAGGAAGTTTGGGGAATGAATTTTGGAGGTCAGCTAAACACTGTTGACACCTATGTCAGATATTTGCGAAAAA
AATTAGATAAAAATATGATAGAAACAATAAGAGGTCTAGGATATCGGCTTAATAAAGATAAATAG

Protein sequence : 
MNLFNVFCYTMSMKRQILIIEDEESISNLLETELSFEGYNVFSAADGMSGLKIFEEKQEYLDVVLLDWMIPKLDGLEVLR
RMKKMTNKVPVIFVTARDYVGDKVAGLDAGADDYLTKPFNIEELMARLRVIFRKNTQPAIYSYGTVSLNPGEHTVEYQEK
ATSLTQREFALLLFLFEHQGEIISRDDILEEVWGMNFGGQLNTVDTYVRYLRKKLDKNMIETIRGLGYRLNKDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-35 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LACR_0898 YP_808869.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 2e-37 43
LACR_0898 YP_808869.1 DNA-binding response regulator HE999704.1.gene1528. Protein 3e-30 42
LACR_0898 YP_808869.1 DNA-binding response regulator BAC0197 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LACR_0898 YP_808869.1 DNA-binding response regulator VFG0596 Protein 2e-35 42