Gene Information

Name : LACR_1596 (LACR_1596)
Accession : YP_809519.1
Strain : Lactococcus lactis SK11
Genome accession: NC_008527
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 1507014 - 1508183 bp
Length : 1170 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGGCTTACTTTAACGACATCGCACCTATCAAATACGAAGGTACAAAAACTAAAAACATGTTTGCCTTCCGCCATTATAA
CCCAGAAGAAGTGGTTGCTGGGAAAACAATGGAAGAACAGCTTCATTTCGCCCTTGCTTTTTGGCATACAATTACGATGG
ACGGGGCTGACCCATTTGGTAGTGCCACAATGGAACGTCCTTGGGACTTGGAAGGTGGCTCTGAACTTGACCGTGCTCAT
CGTCGAGTAGATGCTTTCTTTGAAATTGCCGAAAAATTGGGTGTTAAATATTATTGTTTCCATGATATTGACATCGCGCC
TACAGGAAATTCTTTGAAAGAATTTTATGCAAACTTAGATGAAATTACTGACCATCTTCTTGAAAAACAAAAAGAAACAG
GCATTAAACTCCTCTGGAATACGGCAAATATGTTCTCAAACCCACGTTATATGAATGGGGTTTCGACATCAAATCGTGCT
GAAGTTTTTGCTTATGGTGCTGCTCAAGTCAAAAAAGGACTTGAACTTTCTAAAAAACTTGGTGGTGAAAACTATGTATT
CTGGGGTGGTCGTGAAGGTTACGAATCACTTTTGAACACAGACATGGGTCTTGAAATGGATCACATGGCAAAATTCTTCC
ATTTGGCGATTGATTATGCAAAATCAATTAACCATTTGCCAATCTTCTTGATTGAACTAAAACCAAAAGAACCAATGACT
CACCAATACGACTTTGATGCAGCGACAGCTCTTGCTTTCTTGCAAAAATATGATTTGGACAAATATTTCAAACTCAATAT
TGAAACAAACCATGCTTGGTTGGCTGGTCATACTTTTGAACACGAATTAAATACTGCACGTACTTTTGGTGCCTTAGGTT
CAATCGATGCCAATCAAGGAAATTATTTGCTCGGCTGGGATACTGATGAATTTCCAACACTTGTCATTGATATCACGTTG
CAGGGATGGATACTTATGCACGTGCGCTTAAAGGTGCAGCAGCCATCATTGAAGACAAATTCTTGTCTGATATCGTTGAA
GAACGTTATAGTTCATACAAGAAGACAGAAGTTGGTCAATCTATCGAAAATGGAACAGCAACTTTTGAAAGTCTTGCTGC
TTATGCTCTTGAGCATGGGGATGACATCGAACTTGATTCTAACCACTTAG

Protein sequence :
MAYFNDIAPIKYEGTKTKNMFAFRHYNPEEVVAGKTMEEQLHFALAFWHTITMDGADPFGSATMERPWDLEGGSELDRAH
RRVDAFFEIAEKLGVKYYCFHDIDIAPTGNSLKEFYANLDEITDHLLEKQKETGIKLLWNTANMFSNPRYMNGVSTSNRA
EVFAYGAAQVKKGLELSKKLGGENYVFWGGREGYESLLNTDMGLEMDHMAKFFHLAIDYAKSINHLPIFLIELKPKEPMT
HQYDFDAATALAFLQKYDLDKYFKLNIETNHAWLAGHTFEHELNTARTFGALGSIDANQGNYLLGWDTDEFPTLVIDITL
QGWILMHVRLKVQQPSLKTNSCLISLKNVIVHTRRQKLVNLSKMEQQLLKVLLLMLLSMGMTSNLILTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-99 70
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 5e-99 70