Gene Information

Name : LACR_1248 (LACR_1248)
Accession : YP_809198.1
Strain : Lactococcus lactis SK11
Genome accession: NC_008527
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 1164131 - 1164658 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence :
ATGGGAGAGCTTTTTATAAGCCCAGCTTATCAAGTGCAACGTGTTCCAATTGAAAAAATCAGAGCTAACTCATATAATCC
AAACAAGACTGCACCATCAGAGTTCAAACTATTAGAGCGCTCTATCTTAGAAGATGGCTATACGATGCCAATCGTTTGTT
ATTATGATAAAGAAAAAGATATCTATGAGATAGTGGATGGTTTTCATCGATATCTAGTCATGAAAAATTCGCCAGAAATT
GCTCAAAGAGAACAAAACTGCTTACCAGTGTCAATCATTGACCGTCCCTTAGAAGACAGAATTGCGAGTACCATTCGCCA
CAATCGTGCTAGAGGGACTCATTCTATTGAATTAATGACGAAAATCGTTCAACAATTGGTTGAAGTGGGATTGAGTGACC
GTTGGATAATCACAAATATTGGGATGGATAAAGAAGAATTACTAAGATTAAAGCAATTGAGTGGTTTGGCCTCTTTGTTT
AAAGGAGGAGATTTTTCAAGATCTTGGGAATGGGATAGCGAAGAATGA

Protein sequence :
MGELFISPAYQVQRVPIEKIRANSYNPNKTAPSEFKLLERSILEDGYTMPIVCYYDKEKDIYEIVDGFHRYLVMKNSPEI
AQREQNCLPVSIIDRPLEDRIASTIRHNRARGTHSIELMTKIVQQLVEVGLSDRWIITNIGMDKEELLRLKQLSGLASLF
KGGDFSRSWEWDSEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-49 63
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-38 55
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-38 55
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-27 47
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-25 47
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-25 47
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-27 47
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 5e-25 46
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 5e-25 46
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-25 46
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-14 41
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-14 41
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LACR_1248 YP_809198.1 transcriptional regulator VFG1505 Protein 6e-26 46