Gene Information

Name : LSEI_0952 (LSEI_0952)
Accession : YP_806193.1
Strain : Lactobacillus casei ATCC 334
Genome accession: NC_008526
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 931224 - 931889 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
GTGGCCATTTTGACAGCACGACAACTGACGAAGCAATATGCAGGGGAAAGTCGACCAGCGTTAGATCACGCTGATTTTAG
TATTGAAAAAGGTGAATTTGTGGCAATCGTTGGGCCGAGTGGTTCGGGTAAGTCAACCTTGCTACATCTGCTGGGCGGTA
TTGATCAACCAACCAGTGGTCGGGTACAGCTATACGATACAGATATTTATGCTTTGGATCAGACCCAATTGGCGATTTTT
CGGCGGCGACAAGTCGGGTTGATTTATCAATTCTATAATCTGATTCCCGATTTGACAGTGGTCGAGAACATGACGCTGCC
CGCTGACTTGGACGGTCGAACCGTCGCGACATCTGAGTTGACAGAATTACTGGCTACTTTGGGCCTGACGGAAAAGCAAG
ATGCTTTGCCAAATCAACTGTCAGGCGGCCAACAGCAGCGCGTGGCGATTGGTCGGGCACTGATGAATCATCCGGCCATT
ATTTTAGCCGATGAACCAACGGGCAACTTGGACCGCCGTAATTCACAAGACATCATGACCTTATTGCGACAGGCGAATAT
CAAGCAAGGTCAGACTTTAATTGTGATTACGCATGATCCCGATATTGCTAAGCAAGCAGATCGCGTTGTGACCATCAATG
ACGGTGTGCTACGCGAAGGGCGGTGA

Protein sequence : 
MAILTARQLTKQYAGESRPALDHADFSIEKGEFVAIVGPSGSGKSTLLHLLGGIDQPTSGRVQLYDTDIYALDQTQLAIF
RRRQVGLIYQFYNLIPDLTVVENMTLPADLDGRTVATSELTELLATLGLTEKQDALPNQLSGGQQQRVAIGRALMNHPAI
ILADEPTGNLDRRNSQDIMTLLRQANIKQGQTLIVITHDPDIAKQADRVVTINDGVLREGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-31 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LSEI_0952 YP_806193.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-48 53
LSEI_0952 YP_806193.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-46 50
LSEI_0952 YP_806193.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 7e-30 46
LSEI_0952 YP_806193.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-32 42