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Name : LSEI_0406 (LSEI_0406) Accession : YP_805704.1 Strain : Lactobacillus casei ATCC 334 Genome accession: NC_008526 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 408172 - 409857 bp Length : 1686 bp Strand : + Note : - DNA sequence : ATGAATGAAATACCATGGTGGAAAAAGAGCGTTGTCTATCAGGTTTATCCGAAAAGCTTCAATGATAGTAACGGTGATGG CGTCGGGGACTTAAATGGTATCAGTGAAAAATTGGATTATTTAGCCGATTTGGGCGTAGATGTGCTCTGGCTGAATCCGA TTTACCGATCGCCACAGGTTGATAACGGCTACGATATTTCGAATTATCGCGATGTTGAACCACAATTAGGGACAATGGCC GATTTTGAACACTTGTTGCAGGCAGCACATGATCGACATCTAAAGATTATCTTGGACTTGGTTGTGAATCACACGTCTGA TCAACATCCGTGGTTCAAAGCCGCCAAATCATCAGTGAGCGATCCGCATCACGATTACTACATCTGGAAGAAGCCAGTTG ACGATCATGAGCCTAATAATTGGGGCTCAAGCTTTGGTGGTTCAGCTTGGGAATACAAAAAAGATCTGGGCGAGTATTAC CTGCATCTTTTTGCCAAGCAACAACCGGATCTCAACTGGGAAAATCCTAAGGTACGCCAAGAAGTTTATGATCTCATGCG CTTTTGGCTAGATAAGGGAGTTGATGGCTTCCGGATGGATGTCATATCACTGATTTCTAAAGATCCGGCTTATCCAGATG GCCCGCTCATTCAAGGCAAGGCATACGGTAGTTATTATGCCGGAGCGGCAAATGGCCCTAAGGTTCATGATTACTTGCAG GAAATGCACGAGCAAGTGTTGTCGCACTACAATATCATGACGGTCGGCGAGACGCCCCATACAACGGCACAGCAGGCGCA ATTATACACGGCGGCAGATCGTCACGAGTTGGATATGGTTTTTCATTTTGACCATATGCATCTTGACTATGGCCAATATG GCAAGTTCTCGACAAATCGATTTAAATTAGTTGATCTCAAAGAAGTCTTGGCACGTTGGGAGAACACATTAGCGCAAGTC GATGGCTGGAACAGCCTTTACTGGAGCAACCACGATCAGCCACGGCCTGTGACACGATTTGGAGATGAAGGCCAGTATCG AATTCGATCAGCCAAAATGCTGGGGACTGTGCTGCACATGTTGCAGGGAACGCCTTATATTTTTGAGGGAGAAGAACTCG GTCTGAAGAATGTTCATTTTGATCAATTAAGCGATTATAACGATCTTGAGACCAAGAACATTTTCAAAGAACTCACCCAA CAGCATCATGAAAGTCCTGAGGCGGCCATGAAGGCCATTTATCTGCATTCGCGCGATAATGCTCGTACGCCGATGCCTTG GGATGGCAGTGAAAAAGGTGGTTTCACCACCGGACAACCATGGCTGGGACTAAATCCAGATCACAAAGACATTAATGCAG CTGAAGACTTGGCAGATAGTGACGGTGTTTACCACTATTATCAACACCTGATTAAATTACGACATGAAGAGCCATTGATT ACCACTGGTGTATTTGAGCTACTTGCTCCTGATGATCCGAACTTGTTTATTTACCTGCGCAAAGGGGAACATGAGACCTT GCTGGTGGCAGGTAACTTCTCAAGTGAGGAACGCACATGGTCAGTGCCGGATGACTTGCAAGCTAAGGATGTGGATGTGT TGATTCGGAATAGTGAAATTTCCGATTCACTAGAGAAAACACTGACATTACCACCATTTGGCGCAGTGGTGTACAAGCTT CAATAG Protein sequence : MNEIPWWKKSVVYQVYPKSFNDSNGDGVGDLNGISEKLDYLADLGVDVLWLNPIYRSPQVDNGYDISNYRDVEPQLGTMA DFEHLLQAAHDRHLKIILDLVVNHTSDQHPWFKAAKSSVSDPHHDYYIWKKPVDDHEPNNWGSSFGGSAWEYKKDLGEYY LHLFAKQQPDLNWENPKVRQEVYDLMRFWLDKGVDGFRMDVISLISKDPAYPDGPLIQGKAYGSYYAGAANGPKVHDYLQ EMHEQVLSHYNIMTVGETPHTTAQQAQLYTAADRHELDMVFHFDHMHLDYGQYGKFSTNRFKLVDLKEVLARWENTLAQV DGWNSLYWSNHDQPRPVTRFGDEGQYRIRSAKMLGTVLHMLQGTPYIFEGEELGLKNVHFDQLSDYNDLETKNIFKELTQ QHHESPEAAMKAIYLHSRDNARTPMPWDGSEKGGFTTGQPWLGLNPDHKDINAAEDLADSDGVYHYYQHLIKLRHEEPLI TTGVFELLAPDDPNLFIYLRKGEHETLLVAGNFSSEERTWSVPDDLQAKDVDVLIRNSEISDSLEKTLTLPPFGAVVYKL Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 9e-136 | 49 |
