|
Name : rpmE2 (LSEI_2569) Accession : YP_807734.1 Strain : Lactobacillus casei ATCC 334 Genome accession: NC_008526 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 2549780 - 2550031 bp Length : 252 bp Strand : - Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAGCAAGGCATCCATCCAGATTATCATCCAGTTGTCTTTATGGATTCAGCAACTGGTTTCAAATTTATCTCAGGTTC CACCAAAACTTCAAAAGAAACCGTTAAGTGGGAAGACGGCAAGGAATACCCATTAGTCCGGGTTGAAATTTCATCCGACT CCCATCCCTTCTACACCGGTAAGCAGAAATTCACTCAGGCCGATGGTCGGGTTGATCGTTTCAACAAGAAGTATGGTTTG GACAAGAAATAA Protein sequence : MKQGIHPDYHPVVFMDSATGFKFISGSTKTSKETVKWEDGKEYPLVRVEISSDSHPFYTGKQKFTQADGRVDRFNKKYGL DKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 3e-11 | 44 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 3e-11 | 44 |
