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Name : LSEI_2517 (LSEI_2517) Accession : YP_807695.1 Strain : Lactobacillus casei ATCC 334 Genome accession: NC_008526 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2496800 - 2499307 bp Length : 2508 bp Strand : - Note : - DNA sequence : ATGGACAACTTATTTACCCCTAGTGCTAAAAATGTATTGCTTTTAGCCCAGGAACAAGCGAAGTACTTCCATCATCATGC TGTTGGGACAGAACATTTGCTCATGGCACTGGTCATGGAAAAAGATGGTATCGCTGGTAAGACGCTGCGTCAGTTAGGGG TCACTGAAAATGATGTCCATGACGAGATCGAGCGCTTCACAGGGTATGGGACTGTTGATGCCGCTGGTCAAGCTAGTGAT AGTTATTTGCCTTACTCACCAAAAGGTAAAGAGATTTTGGCGTTTGCAGGTGACGAAGCAAAACGGTTAGGTGCTTTAAA GATCGGTACCGAGCACGTTTTGCTTGGCTTGCTACGTGAAGATGACATCTTGGCAGCACGGATTTTGCAAAACCTTGGTC TCAGTCTTTCGAAGACGCGTCAAATGGTCTTCAAGAAGATGGGGATTGCGGACACTGCAGCAAAGCGTCGTCCAATGGCA CGTGGCGGTGCTCGTCAAGATGGACAAGGTACGCCAACGCTAGATGGTTTGGCGCGGGATTTGACCCAAATGGCGCGCGA GAATCGGATGGATCCGGTTGTTGGGCGTGACAAAGAAGTACGCCGGCTGATCCAGATTCTGGCACGGCGGACAAAGAACA ACCCTGTACTGATTGGCGAACCTGGTGTTGGTAAAACTGCAATTGCAGAAGGCTTTGCTGAAAAAATTGTGTCTGGTAAA GTGCCGGATGACATGGTCAACAAGCGTTTGATGATGCTTGATATGGGCTCACTTGTCGCTGGCACCAAGTATCGTGGTGA GTTTGAAGATCGGCTGAAGAAGATCATTGATGAAATTTATAAAGATGGCAATGTCATTTTGTTCATTGATGAATTGCATA CTTTGATCGGTGCTGGCGGTGCAGAAGGCGCTATTGATGCTTCCAATATTTTGAAACCGGCATTAGCTCGTGGTGAATTA CAATTGATCGGTGCCACGACCTTAGATGAATATCAAAAGTATATTGAAAAAGATGCTGCTTTGGAGCGGCGGTTTGCGAC GATTCAAGTCGACGAACCAACTGAAGAAGAAGCTGAACAAATTTTGAAGGGCTTGCGTCCTCGTTATGAGGCGCATCACG GTGTCACGATTACTGACGAAGCGCTGCATCAGGCGGTGGTTTTGTCATCACGGTACATCACGACTCGGTTCTTGCCTGAC AAGGCAATTGATCTAGTTGACGAAAGTGCGGCGAAGGTTCGCTTGGACAAGGCCAATGTTGAGACGAAGGCCGACAAGCT TCAGGATGAACTGGCCAAGCTGGTAGCTGATAAAGAAGACGCTATTGACCATCAAGATTTCGAAACGGCTGCGAACATCC GGACTCAGGAAGCTGATTTAAAAACGAAGTTGGCCGACACGCCTGAACCAGTTAATGAAAGTGGCGTTCGAACTGACATT AAAGTGACGGGCGACGATGTGGCAGAAGTGGTTTCTCAATGGACCGGTGTGCCAGTCACCCAGTTGCAGAAAAAAGAATC CGATCGGTTGGTTAACTTGGAGAAGATCCTGCATGAGCGGGTTGTTGGCCAAGACGAAGCAGTTTCCGCCGTCGCGCGTG CTATCCGGCGTGCTCGTTCTGGTTTGAAAGATCCGACGCGGCCAATTGGTTCCTTCATGTTCCTCGGGCCGACAGGTGTT GGGAAAACGGAGCTGGCTAAGGCGTTAGCCGAGGCAATGTTTGGTTCTGAAGATGCCATGATCCGGGTTGATATGTCTGA GTACATGGAGAAATTTAGTACCAGTCGGTTGATCGGCGCGGCCCCTGGTTATGTTGGTTACGACGAAGGCGGTCAACTAA CCGAAAAAGTCCGCAACAAGCCTTACTCGGTTGTGTTGTTGGACGAAGTTGAAAAGGCGCATCCAGATGTCTTTAACATT TTGCTGCAAGTGCTGGATGATGGCTATTTAACCGATTCAAAAGGTCGGCGGGTTGATTTCCGTAACACGATTTTGATCAT GACCAGTAATATCGGCGCAACCGCTATTCGTGACGATAAGACTGTTGGCTTTGGTGCCAAGGATCCACAAGCTGACTTTA ATGCCATGAAGAGCCGGATGCTGGACGAACTTAAAAAAGCGTTCCGACCAGAATTCCTTAACCGAATTGATGAAACCGTG GTCTTCCACAGTCTCAACAAGGCTGAGCTGCATGAAATCGTTAAGATCATGACGAAGACAGTGCTTAGTCGCATTAAGGA TCAAGGGATTGACGTTAAAATTACCCCAGCCGGTATTGACGCTGTCGCCGCTGCCGGCTTCGATCCAGAGTACGGTGCAC GTCCAATTCGGCGGGCACTGCAAACCGGTGTCGAAGATCAGTTAAGTGAACTCTTATTGACAGGCCAAGCTAAAACCGGT GACTTGATCCAAATCGGTGCTAAAAAAGGCAAGCTGACATTTACTGTTAAAGAGAACAAAGGCAAGCAAAAAGAAAACGG TGCTTCAAAAGAACCCGTTAAAGCCTAG Protein sequence : MDNLFTPSAKNVLLLAQEQAKYFHHHAVGTEHLLMALVMEKDGIAGKTLRQLGVTENDVHDEIERFTGYGTVDAAGQASD SYLPYSPKGKEILAFAGDEAKRLGALKIGTEHVLLGLLREDDILAARILQNLGLSLSKTRQMVFKKMGIADTAAKRRPMA RGGARQDGQGTPTLDGLARDLTQMARENRMDPVVGRDKEVRRLIQILARRTKNNPVLIGEPGVGKTAIAEGFAEKIVSGK VPDDMVNKRLMMLDMGSLVAGTKYRGEFEDRLKKIIDEIYKDGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL QLIGATTLDEYQKYIEKDAALERRFATIQVDEPTEEEAEQILKGLRPRYEAHHGVTITDEALHQAVVLSSRYITTRFLPD KAIDLVDESAAKVRLDKANVETKADKLQDELAKLVADKEDAIDHQDFETAANIRTQEADLKTKLADTPEPVNESGVRTDI KVTGDDVAEVVSQWTGVPVTQLQKKESDRLVNLEKILHERVVGQDEAVSAVARAIRRARSGLKDPTRPIGSFMFLGPTGV GKTELAKALAEAMFGSEDAMIRVDMSEYMEKFSTSRLIGAAPGYVGYDEGGQLTEKVRNKPYSVVLLDEVEKAHPDVFNI LLQVLDDGYLTDSKGRRVDFRNTILIMTSNIGATAIRDDKTVGFGAKDPQADFNAMKSRMLDELKKAFRPEFLNRIDETV VFHSLNKAELHEIVKIMTKTVLSRIKDQGIDVKITPAGIDAVAAAGFDPEYGARPIRRALQTGVEDQLSELLLTGQAKTG DLIQIGAKKGKLTFTVKENKGKQKENGASKEPVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LSEI_2517 | YP_807695.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 61 |
| LSEI_2517 | YP_807695.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 2e-146 | 48 |
