|
Name : LSEI_2421 (LSEI_2421) Accession : YP_807599.1 Strain : Lactobacillus casei ATCC 334 Genome accession: NC_008526 Putative virulence/resistance : Virulence Product : metal ion ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0803 EC number : - Position : 2410817 - 2411758 bp Length : 942 bp Strand : - Note : - DNA sequence : ATGAAAAAGATTCTAATCAGTGTTGTTGCTGTTTTAACCATGGTTGCAGGGGTTCTCTGGTTTGTAAACAACCGCAGTAC GACTCAGAAAGATTCAGCAAGTACTAACCAACAATTACGTGTCGTCACCACCAACTCGATTCTTGAAGACATGGTGCACA ATGTCGGCGGTGATCGCATTGAACTCTATAGTATCGTCAAGCGCGGCACCGACCCGCACGAATATGAACCGCGACCGACC GACGTTGCTGCCACTAGTGAAGCCGATGTTGTCTTCCACAATGGCCTCAACCTTGAAACTGGCGGAAATGGTTGGTTCAA AAAGTTAGTTCAAACATCGCATAAAGCTTTTAACAAAGACGTTTTTGCTGCCAGTGACGGGGTTAATCCGATGTACCTGA CGACCAATACGAAGGAACAAGACCCGCACGCTTGGCTTGATCTGGCCAACGGGATTCAATACGTGAAAACCATCACCAAG GTGTTGAAGCAAAAAGATGCCAAGAATGCCAATTATTACCAGATGAATGCAGATCAATACGTTGCTAAGCTGCAAAAACT GCATCAAACCGCTCAATCTCAGTTCCTTGATATTCCGGAACGCCAGCGGTTGCTCGTTACATCAGAAGGCGCCTTCAAGT ATTTCTCTAAGGCTTATCACGTCACACCGGCCTATATCTGGGAAATTAACACCGAAGCCCAAGGTACGCCTGAGCAGATG CAGACGGTTTTAGCGAAAATTCGCGCCTCCGATGTTAAGCATTTGTTTGTCGAAAGTTCTGTTTCACCGAAGTCCATGAA CAAAGTTGCTAAAGAAACCGGCCTATCGATTCACGCCAAAATCTTTACCGACTCCTTGGCAGCAAAAGGCACCAAAGGCG ATACGTACTACAGCATGATGAAATGGAACCTAGATAAGATTCACGACGGTTTGGCGGAATAA Protein sequence : MKKILISVVAVLTMVAGVLWFVNNRSTTQKDSASTNQQLRVVTTNSILEDMVHNVGGDRIELYSIVKRGTDPHEYEPRPT DVAATSEADVVFHNGLNLETGGNGWFKKLVQTSHKAFNKDVFAASDGVNPMYLTTNTKEQDPHAWLDLANGIQYVKTITK VLKQKDAKNANYYQMNADQYVAKLQKLHQTAQSQFLDIPERQRLLVTSEGAFKYFSKAYHVTPAYIWEINTEAQGTPEQM QTVLAKIRASDVKHLFVESSVSPKSMNKVAKETGLSIHAKIFTDSLAAKGTKGDTYYSMMKWNLDKIHDGLAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0095 | AAM75298.1 | EF0095 | Not tested | Not named | Protein | 5e-79 | 53 |
| EF0577 | NP_814342.1 | adhesion lipoprotein | Virulence | Not named | Protein | 6e-79 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LSEI_2421 | YP_807599.1 | metal ion ABC transporter substrate-binding protein | VFG2165 | Protein | 9e-82 | 61 |
| LSEI_2421 | YP_807599.1 | metal ion ABC transporter substrate-binding protein | VFG1359 | Protein | 5e-78 | 54 |
| LSEI_2421 | YP_807599.1 | metal ion ABC transporter substrate-binding protein | VFG2157 | Protein | 3e-73 | 53 |
