|
Name : LSEI_2290 (LSEI_2290) Accession : YP_807476.1 Strain : Lactobacillus casei ATCC 334 Genome accession: NC_008526 Putative virulence/resistance : Unknown Product : transcription antiterminator Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 2289722 - 2290276 bp Length : 555 bp Strand : - Note : - DNA sequence : ATGGCTGAAACAGTTACATCGGCAGAAAAACGCTGGTACGTGTTGCATACTTATTCCGGTTACGAGAATAAGGTGAAGAC CAACCTTGAACAGCGGACTAGCAGTATGAACATGGACGATTATATTTTCCGTGTGGTTGTGCCTGAAGAAGAAGAACATG AACAAAAGAATGGTAAAGAGAAGATCGAAATGAAAAAGACCTTCCCTGGTTACGTGTTGGTTGAAATGGTGATGACTGAT CAATCATGGTTCGTTGTTCGTAACACACCGGGTGTGACCGGCTTTGTCGGTTCTCACGGCGCTGGCTCTAAGCCTGCACC ACTATTGCCTGAAGAAGTTGCCAATGTTTTGCATTCTATGGGTATGAGTACCCGTCACAATGACGTTGAATTCGATGTTG GCGAACCAGTGACGATTATTGATGGTGCCTTCACCGGTATGCACGGTAAAGTCACGGCAGTTGATAAGGAAAAGATGAAG TTGAAAGTTGTCACCGAAATGTTCGACCGCGAAGTTACCGCGGAACTGGATTTCGATCAAGTCGACAAGCTGTAG Protein sequence : MAETVTSAEKRWYVLHTYSGYENKVKTNLEQRTSSMNMDDYIFRVVVPEEEEHEQKNGKEKIEMKKTFPGYVLVEMVMTD QSWFVVRNTPGVTGFVGSHGAGSKPAPLLPEEVANVLHSMGMSTRHNDVEFDVGEPVTIIDGAFTGMHGKVTAVDKEKMK LKVVTEMFDREVTAELDFDQVDKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 6e-40 | 54 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 9e-38 | 53 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 9e-28 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 9e-28 | 41 |
