Gene Information

Name : LSEI_1884 (LSEI_1884)
Accession : YP_807085.1
Strain : Lactobacillus casei ATCC 334
Genome accession: NC_008526
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1878106 - 1878813 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGATGTAGTCGTTTCCGTCAAACATTTAACAAAAGAGGTTGCGTTAGCTCAGGGAAATACGCTGAAGGTGCTTGA
TGATATTTCTTTTGACGTCAATCAAGGCGTATTTGTGTCGATTGTTGGTCCATCCGGATCAGGAAAATCGACACTGCTCT
ACTGTATTTCTAGTCTATTACCACCTTCTAAAGGCAAAATCCTGATTAAAGGAAAATCACCATACGAGTGGCGTGCTTCA
AAGTTGGCAAAATTTCGTCGGAAAGAGATAGGTTTTATTTTTCAGGACTTTCAGTTAGTCAGCTCTTTATCTGCTTATGA
CAATTTACTGCTTCCGGGTATTCTAAATGGTCAGAAAATTAAACCGCCAATGGTTGACGCATTAGCAGCGAAACTCGAAT
TGACAGCCGAGTTACACCAGTCGATTGACGCGCTTTCTGGCGGAGAACAACAGCGCGTCGCCATTGCGCGAACTGTGCTT
GCTGACCCAGATATCATTTTTCTAGATGAACCGACAAGTGCACTAGACACGCATTCACGTCAGTTAGTCATGAAGCTATT
TCAAGAACTGGTCAATCAAGGCAAGACTTTGATCATGGTCACCCATGATTTAGAACTCGCTGGGGAAACTTCACGGTCGA
TTGTGCTACGAGATGGCCGAATTGAAAGGGAGATTCAAATGCCCGCGGCTGAAACTGTGCGTATCTGA

Protein sequence : 
MNDVVVSVKHLTKEVALAQGNTLKVLDDISFDVNQGVFVSIVGPSGSGKSTLLYCISSLLPPSKGKILIKGKSPYEWRAS
KLAKFRRKEIGFIFQDFQLVSSLSAYDNLLLPGILNGQKIKPPMVDALAAKLELTAELHQSIDALSGGEQQRVAIARTVL
ADPDIIFLDEPTSALDTHSRQLVMKLFQELVNQGKTLIMVTHDLELAGETSRSIVLRDGRIEREIQMPAAETVRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-39 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LSEI_1884 YP_807085.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-32 44
LSEI_1884 YP_807085.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-33 41