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Name : LSEI_1175 (LSEI_1175) Accession : YP_806405.1 Strain : Lactobacillus casei ATCC 334 Genome accession: NC_008526 Putative virulence/resistance : Unknown Product : acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 1156142 - 1157332 bp Length : 1191 bp Strand : - Note : - DNA sequence : GTGCTCAACAAAACTCGCGCACAAAGTCTGCAACAGCTGACTGTCGCGACAAAGGATGGTGCAATCATGACAGAACCAAT TGCCCTGCTCCAAAAGCTGATTCAAATCAATTCTGTAAATGGCAACGAGCTCGCCGTCGCCAAATTGCTGCAAGCCGAAC TTGAGGCTGCCGATATTCCTACCAAGCTGATCCCCTACACAGAAGACCGCGTGAATTTAATTGCCGAATTAAACCATGGT GATCGCGTTCTCGGTTTCACTGGCCACGAAGATGTTGTGAGTCCTGGAGACGAGTCAGCCTGGACGTATCCGCCTTTTTC CGGCAAAGTCGTCGACAATGTGATGTATGGTCGTGGCACCGATGATATGAAAAGCGGTTTAGCCGCCATGGTGCTGGCCC TGATCGCCCTCAAACAATCCGGGTTCACTCATCCGATTCGCTTGATTGCAACGGTAGGCGAAGAATACGGTGCGATGGGC GCACGTTTGCTGACAGAGCAAGGCTATGCCGATGATCTCGCTGGCTTAGTTGTTGGTGAACCCACCACTAAAATCTTAAA ATACGCACATGCTGGCACCGTGAATTACGAGATTGACAGTGAAGGCGTCTCTGTCCATAGTTCTAGGCCTGAAAAAGGCG TCAATGCCATCGATGGTCTAACAACTTTTGCCGCACTGGAACACCACGCCTTTGACAAGGCGCCTGCTGACCCGGATCTC GGCCCATTTCGACATTCAATCACGGTCATCAATGGCGGCGACCAAGTCAACACCATTCCAGCCCACGCTTTCCTTCGTGG CAATCTTCGCCCGACCCCATCGGCCAATATTGAGCTGGTTGTGAAAATGCTTGAAGACTTAGTGGCACATGTCAACGCCA CGACCAATGCGAAACTCACGTTGAAAGTATTGCACCGTTTTCTGCCGGTTCACTCCGATAAAACAGGCCACTTGGTAACT TCGGCAAATGCTGCCATCGCGTCGGTAACTGGTAAACCAGCTGAATTAGCCGTTGCGTTTGGAGGAACCGATGCTTCCGA GTTCATCAAATCAACTAACCATTTTGATGTGATTGTCTATGGCCCCGGTGATAACCACTTCAGTCATCAAGTGAATGAAC ACATCGACCTGAACAGTTACACAACGGCGATCAAAATTTATCAAGAAATTGCCAAGCGCTTCTTCGAATAA Protein sequence : MLNKTRAQSLQQLTVATKDGAIMTEPIALLQKLIQINSVNGNELAVAKLLQAELEAADIPTKLIPYTEDRVNLIAELNHG DRVLGFTGHEDVVSPGDESAWTYPPFSGKVVDNVMYGRGTDDMKSGLAAMVLALIALKQSGFTHPIRLIATVGEEYGAMG ARLLTEQGYADDLAGLVVGEPTTKILKYAHAGTVNYEIDSEGVSVHSSRPEKGVNAIDGLTTFAALEHHAFDKAPADPDL GPFRHSITVINGGDQVNTIPAHAFLRGNLRPTPSANIELVVKMLEDLVAHVNATTNAKLTLKVLHRFLPVHSDKTGHLVT SANAAIASVTGKPAELAVAFGGTDASEFIKSTNHFDVIVYGPGDNHFSHQVNEHIDLNSYTTAIKIYQEIAKRFFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 7e-66 | 43 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-66 | 43 |
