Gene Information

Name : PEPE_0008 (PEPE_0008)
Accession : YP_803561.1
Strain : Pediococcus pentosaceus ATCC 25745
Genome accession: NC_008525
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 9377 - 9904 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAACCGAACAGTGCTTGTCGGACGCCTAACAAGGGACCCTGAACTACGATATACAGGTAGTGGAGCTGCAGTAGT
AACTTTTACAGTTGCTGTTAATCGTCAGTTTACTAATTCACAAGGTGAACGCGAAGCTGACTTTATTAATTGTGTTATGT
GGCGTAAAGCTGCAGAAAACTTTGCTAACTTCACTCGGAAGGGTTCATTAGTTGGTATCGACGGACGGATTCAAACCCGT
TCTTATGAAAACCAACAAGGCCAACGAGTTTATGTTACCGAGGTTGTAGCCGAAAACTTCTCTCTTCTTGAATCACGTTC
ATCTTCTGAACGTCGTCAAGGTGGAGAAAATAATTTTGGCAATAATCAATCTGCCCCTTCACAACAACCAACATCATCCG
GAAATCCATTTGACGGAGGACAATCGAATAATAGTGGTGCACAACAACCTAACAATTCGAACCCTAATGACCCATTTGCT
AATAGCGGTCAGTCAATTGATATTTCTGACGATGATTTACCATTCTAA

Protein sequence : 
MINRTVLVGRLTRDPELRYTGSGAAVVTFTVAVNRQFTNSQGEREADFINCVMWRKAAENFANFTRKGSLVGIDGRIQTR
SYENQQGQRVYVTEVVAENFSLLESRSSSERRQGGENNFGNNQSAPSQQPTSSGNPFDGGQSNNSGAQQPNNSNPNDPFA
NSGQSIDISDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-37 51
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-37 51
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 1e-31 49
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-30 49
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-31 48
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-31 48
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-31 47
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-31 47