Gene Information

Name : PEPE_0243 (PEPE_0243)
Accession : YP_803782.1
Strain : Pediococcus pentosaceus ATCC 25745
Genome accession: NC_008525
Putative virulence/resistance : Unknown
Product : ABC-type proline/glycine betaine transport system, ATPase component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 287384 - 288349 bp
Length : 966 bp
Strand : +
Note : -

DNA sequence : 
GTGGCTAAAACAATGATCGAATTTCAACATGTGAAAAAGGATTTTGGAAATCATAGCGTAATTAAAGATATTAGTTTCGA
AGTTCAAGAAGGTGAAATTTTTGTCCTAGTGGGAACTTCCGGTAGCGGAAAAACTACGACACTCAAGATGATTAATCAAC
TTTTCGTTCAAACAGAAGGCGATATCTTGTTCAATGGTAAGAAGATTAAAGATTACAATCTCCGAGAGCTGCGTCTGAAT
GTAGGATATGTTCTACAACAAATTGCATTGTTTCCCACGATGACCGTTGAACAAAATATTGCGTTAATTCCTGAAATGAA
ACACTTTAAAAAAGAGGATATAAAAAGACGGGTAGATCAACTCCTTGGTGATGTTGATCTTGATCCTGAAAAGTATCGAA
ATCGCCACCCCAGTGATCTTTCGGGTGGTGAACAGCAACGCATTGGGATTTTACGGGCGATTGCTTCAGAACCACCAGTC
GTCCTGTTTGATGAACCTTTTAGTGCGTTAGATCCATTAGTGCGAAATCAATTACAAGATTTGGTTTTGAAGTTACATCA
AAAGTTGAAGAATACGATTATATTTGTTACCCATGATATGGATGAAGCTTTAAAACTAGGAGATCGAATTGGGGTTATGA
ACGATGGTAAATTATTGCAAGTCGCCACCCCAAAGGAAATTGCACAGAATCCGGAAAATGCTTTTGTGGAGAATTTCTTC
TCTGCTACGGTGGGTAAAAATCTATATAAGACACCTATTGAAAAAATTATTCGAACGGGCTTTGAAATTCCAGAACCGCA
TGAGGCAGAACCAATATCTGAAATTAATGCTAAAGATACTTTAGAAAAAGCTTTTGCAGCAATGGCTGAAGTAGAAATAT
TAAAAGTAGTAGATGAAGATAAATCAACGGTTAATTGGGTTGACCGAGCATCATTATTTAGGTATTTAAGTGAAACCAAA
CATTAA

Protein sequence : 
MAKTMIEFQHVKKDFGNHSVIKDISFEVQEGEIFVLVGTSGSGKTTTLKMINQLFVQTEGDILFNGKKIKDYNLRELRLN
VGYVLQQIALFPTMTVEQNIALIPEMKHFKKEDIKRRVDQLLGDVDLDPEKYRNRHPSDLSGGEQQRIGILRAIASEPPV
VLFDEPFSALDPLVRNQLQDLVLKLHQKLKNTIIFVTHDMDEALKLGDRIGVMNDGKLLQVATPKEIAQNPENAFVENFF
SATVGKNLYKTPIEKIIRTGFEIPEPHEAEPISEINAKDTLEKAFAAMAEVEILKVVDEDKSTVNWVDRASLFRYLSETK
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-39 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-40 45