Gene Information

Name : PEPE_1831 (PEPE_1831)
Accession : YP_805292.1
Strain : Pediococcus pentosaceus ATCC 25745
Genome accession: NC_008525
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1809020 - 1809499 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence :
GTGAATATTAAAATTATTGTTGTGGGAAAGTTAAAAGAAAAATATTTGAAACAGGGGATAGCAGAATACTCGAAAAGATT
GTCAAAATTTTGTAAGTTCCAAATTATTGAAGTTCCAGATGAAAAAGCACCCGAAAGTTTAAGCGATGCTCAAATGAATG
AAGTTAAAGTTAAGGAAGGAGAACGTATTTTAGGTAAAATTAAAGATCGAGACTATGTTTTTACCCTAGAAATCAAAGGA
AAAGAACGCTCTTCTGAAGAATTATCAGCAGAGATGGCTAAATTAGCTACTTATGGAAACTCTGATATCACATTTGTGAT
CGGGGGTTCGTTAGGTCTTAGTGATGCAGTAATGAAACGTTCTAATTCCGCCATTTCATTTGGGCGCTTTACTCTACCGC
ACCAATTGATGCGACTAGTGTTAACTGAGCAAATTTATCGTTCGTTTATGATTCAGGCGGGAAGTCCGTATCATAAATAA

Protein sequence :
MNIKIIVVGKLKEKYLKQGIAEYSKRLSKFCKFQIIEVPDEKAPESLSDAQMNEVKVKEGERILGKIKDRDYVFTLEIKG
KERSSEELSAEMAKLATYGNSDITFVIGGSLGLSDAVMKRSNSAISFGRFTLPHQLMRLVLTEQIYRSFMIQAGSPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-41 60
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-41 60
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-41 60
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 9e-43 60
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-41 60
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-41 60
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-41 60
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-41 60
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-41 60
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-41 60
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-41 60
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-41 60
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-41 60
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-41 60
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-41 60
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-41 59
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 6e-38 58
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-41 57
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 8e-25 54