Gene Information

Name : PEPE_1829 (PEPE_1829)
Accession : YP_805290.1
Strain : Pediococcus pentosaceus ATCC 25745
Genome accession: NC_008525
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1808227 - 1808421 bp
Length : 195 bp
Strand : +
Note : -

DNA sequence :
TTGGAAAATAGCATTGCGGTCCGGCGTAAAAAACTTAAATTATCTCAAGCCGAAGTCGCGCAACTTACTCACGTTACACG
CCAAACTATCAACGCCATTGAGAACGATAAATACGATCCCTCCTTAGCGCTAACTTTCAATCTAGCGCATATCCTACAAA
CAACTGTAGATGAATTATTTGTATTTGAACAATAA

Protein sequence :
MENSIAVRRKKLKLSQAEVAQLTHVTRQTINAIENDKYDPSLALTFNLAHILQTTVDELFVFEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-09 55
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-08 44
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-09 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PEPE_1829 YP_805290.1 transcriptional regulator VFG2175 Protein 3e-09 44
PEPE_1829 YP_805290.1 transcriptional regulator VFG2168 Protein 3e-09 44