Gene Information

Name : PEPE_1645 (PEPE_1645)
Accession : YP_805108.1
Strain : Pediococcus pentosaceus ATCC 25745
Genome accession: NC_008525
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1628411 - 1630501 bp
Length : 2091 bp
Strand : -
Note : -

DNA sequence :
ATGAATCATAAGCAAATGAATGAAGAGCACATGGACCATTCAAAAATGGATCATTCCCAGATGCATCATGAGATGAGTGG
ACATCAACATGACATGCACGATATGCATGACATGGGCGATGGACATATGATGCACATGGGGAATCTAAAACAATTATTTT
GGGTAAGCTTAATTGCTACTATTCCAATTCTATTATTATCGCCATTTATGGGAATGGATTTTAGAATTGGTGACTTGAAA
TTGCCGATTAGTTTTACCGGTTCTGATTATATTGTCTTAATCTTAGCAACCTTCTTATTCTTCTATGGGGGTAAGCCTTT
TTTGGCTGGGGCAGTCAGTGAGTTAAAATCAAAAGCACCCGCAATGATGACTTTAATTGCGATGGGAATTACCGTAGCAT
ACGGCTATTCGCTTTATGCATTTATAATGAATCAATGGATTAATCCTAGCGGTCATGTAATGGACTTCTTTTGGGAACTT
GCAACACTAATTGTAATTATGCTTCTAGGGCACTGGGTAGAAATGAATTCAGTGATGGCGGCAGGCTCTGCAGTTGAAAA
AATGGTCGCACTTTTACCTAGTCAAGCGCATGTTTTGCATGGAGATCATGTCATGGATATGGATTTGAGCGATGTTGAAG
TTGGCCAAACGGTCCGCGTACTTGCAGGAGAACAAATTCCAACTGATGGTGACGTAGTTTCAGGTTCAACTAAAGTAAAT
GAATCTTTAGTAACTGGTGAAGCACGTTTAATCGATAAAAAAGAAGGTAGTCAAGTAATTGGTGGAGCAGTTAACGGAGA
CGGAGTTATCGAAGTTAAGGTTACTGGAACTGGCGAAAGTGGCTATCTATCACAAGTAATGAAGTTAGTTAGTGACGCTC
AAAAATCTAAATCCAAAGCTGAAAGTTTGGCTGATAAAGTAGCTTCATGGTTATTCTATGCGGCTCTAATTGTTGGTGTG
ATTGCGTTTGTGGCTTGGTTACCACAAGGCTTGGATGTGGCATTTGAACGAATGGTGACGGTCTTTATTATTGCTTGTCC
GCATGCTTTAGGTCTAGCAATTCCATTAGTAGTTGCACGAAGTACCAGTATTGCGGCCACCAATGGTTTACTAGTTCGTA
ACCGTCAATCGATTGAAGAAGCTAAAAAAGTTAAATACGTCCTAATGGATAAAACTGGTACATTAACAGAAGGGAAATTC
ACGGTTAACGCAGTTAAGAGTTATGCTGACGATTTAAACCAAGATGATATTCTAGCACTGATGGCTAGCTTAGAAGACCA
TTCCGATCATCCTTTAGCAACTGGTATTAAAGCAGCAGCTAAAAAGCTGAAGCAAACAATTAAAACAGCTCATGATGTTT
CAGCCCAAAAAGGGATTGGTTTAACAGGTACAATCGAAGGTCAGAAGTATCAGATTGTGAACGCCTCTTATTTGAAACAA
AAAGAGATTAAGTTTGATACAAATGATTTTGAGAAATGGAGCACAGCTGGTAATTCAGTTTCATTCCTAGTAAGAGAAAA
TCAAGTTTTAGGTGGATTAGCTGAAGGTGACCAAATAAAGGAAAATGCAGTTTCCTTTATTAAAGAACTAAAGCAATTGG
GTTATATTCCGGTAATGTTGACGGGAGATAACCAACAAACAGCGCAAAAAATTGCGGCAAGCCTTCAAATTGATGAATGG
CATGGAGAATTATTACCAGAAGACAAACTAAAGGCACTTGAAAAATATCAAGAACAAGGAAAAGTAATTATGGTAGGAGA
CGGCATCAACGATGCGCCTAGCCTTGCTAAAGCAAACATTGGAATTGCCATTGGAGCCGGAACGGACGTTGCAATTGATT
CCGCTGATGTAGTCCTTGTGCACAGTGATCCAAGTGATATCTTGAACTTCTTGAAATTAGCTCAAGCAACCAATGCTAAA
ATGGTTCAAAACCTCTGGTGGGGAGCTGGATATAACTTATTTGCAATTCCACTAGCAGCTGGAATTTTGGCTCCGATTGG
ATTCGTCCTTAGTCCGGCAGTTGGAGCGGTGTTAATGTCACTTTCAACCGTTATTGTGGCATTGAACGCGTTGGCGTTAA
AGATTAAGTAA

Protein sequence :
MNHKQMNEEHMDHSKMDHSQMHHEMSGHQHDMHDMHDMGDGHMMHMGNLKQLFWVSLIATIPILLLSPFMGMDFRIGDLK
LPISFTGSDYIVLILATFLFFYGGKPFLAGAVSELKSKAPAMMTLIAMGITVAYGYSLYAFIMNQWINPSGHVMDFFWEL
ATLIVIMLLGHWVEMNSVMAAGSAVEKMVALLPSQAHVLHGDHVMDMDLSDVEVGQTVRVLAGEQIPTDGDVVSGSTKVN
ESLVTGEARLIDKKEGSQVIGGAVNGDGVIEVKVTGTGESGYLSQVMKLVSDAQKSKSKAESLADKVASWLFYAALIVGV
IAFVAWLPQGLDVAFERMVTVFIIACPHALGLAIPLVVARSTSIAATNGLLVRNRQSIEEAKKVKYVLMDKTGTLTEGKF
TVNAVKSYADDLNQDDILALMASLEDHSDHPLATGIKAAAKKLKQTIKTAHDVSAQKGIGLTGTIEGQKYQIVNASYLKQ
KEIKFDTNDFEKWSTAGNSVSFLVRENQVLGGLAEGDQIKENAVSFIKELKQLGYIPVMLTGDNQQTAQKIAASLQIDEW
HGELLPEDKLKALEKYQEQGKVIMVGDGINDAPSLAKANIGIAIGAGTDVAIDSADVVLVHSDPSDILNFLKLAQATNAK
MVQNLWWGAGYNLFAIPLAAGILAPIGFVLSPAVGAVLMSLSTVIVALNALALKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 8e-124 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PEPE_1645 YP_805108.1 cation transport ATPase BAC0079 Protein 6e-167 57
PEPE_1645 YP_805108.1 cation transport ATPase BAC0383 Protein 2e-130 48
PEPE_1645 YP_805108.1 cation transport ATPase BAC0629 Protein 1e-119 47