Gene Information

Name : araD (PEPE_0164)
Accession : YP_803713.1
Strain : Pediococcus pentosaceus ATCC 25745
Genome accession: NC_008525
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 195108 - 195836 bp
Length : 729 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAGAAGTTAAAACAGGAAGTTTACGAAGCAAACATGCAACTTCCTAAATTAGATTTAGTTACCTTTACTTGGGG
TAACGTTTCAGGAATTGACCGCGAAAAAGGTCTATTCGTTATCAAACCATCTGGAGTCGACTATGACAAGTTGAAACCAG
AAGATATGGTAGTAGTAAATTTGAAGGGTGAAGTTGTGGAAGGTGAAATGAATCCTTCTAGTGACACACCAACGCATACG
GTTTTGTATAACGAATTCCCAGAAATCGGTGGGATTGTACATACCCATTCTCCATGGGCTGTTTCCTTTGCCGCTGCAGA
AATTGATGTACCAGCTTTAAGTACAACCCATGCTGATACATTCTACGGCGACGTGCCGGTAACTCCGGCACTCACTAAAG
AAGAGATTGAAGGCGGTTATGAAGAAAATACTGGTAAGGTAATTGTTAAGACATTCAAGGAACGTAAGATTGATCCAGAA
GCAGTTCCAGCTGTTTTGGTTAGCCAACATGGACCATTTGCTTGGGGTAAGACGCCTGACAAAGCGGTTTACAATGCAAA
GGTTTTGGAAGTTGCTTCAGAAATTGATTACCACGCTCTTCAAATGACTAGAAGAAATATTGAAGTTCCTCAATATTTGT
TAGATAAACATTATTACCGTAAGCATGGTAAGAATGCCTACTACGGTCAAGAAAATGCTAAGTCTAAAGAACATGCAGCA
AGAAAATAA

Protein sequence :
MLEKLKQEVYEANMQLPKLDLVTFTWGNVSGIDREKGLFVIKPSGVDYDKLKPEDMVVVNLKGEVVEGEMNPSSDTPTHT
VLYNEFPEIGGIVHTHSPWAVSFAAAEIDVPALSTTHADTFYGDVPVTPALTKEEIEGGYEENTGKVIVKTFKERKIDPE
AVPAVLVSQHGPFAWGKTPDKAVYNAKVLEVASEIDYHALQMTRRNIEVPQYLLDKHYYRKHGKNAYYGQENAKSKEHAA
RK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 5e-60 56