|
Name : PEPE_1427 (PEPE_1427) Accession : YP_804906.1 Strain : Pediococcus pentosaceus ATCC 25745 Genome accession: NC_008525 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1406138 - 1408603 bp Length : 2466 bp Strand : - Note : - DNA sequence : ATGGAAAATTTATTTACCCCTAGTGCAAGAAATGCCTTGGTTATTGCTCAAGAACAAGCAAAAAGATTTAAACACCCCGC GGTGGGTACTGAACACCTGTTGTTAGCATTGGCAATTGAGACCAATGGTGTAGCGCGAAGCGTCTTAGGACAATTCAATG TTACAGAAGTGGACGTTGCTGAGGAAATTGAGCAATTTACCGGCTATGGTAACTTACGAACAGTAAAAGATGATTATTTA CCATATTCACCAAAAGCTAGTGAAATTTTAGTCAACGCTCAAGAGCAGGCTAAGCAATTAAACGCTATTAAAATTGGAAC CGAACATTTATTACTTGCTTTAGTACAAAATGATAATATTTTGTCTTCAAGAATTTTATTGGCGTTGGATACAGATATTG CCGAGGTTCGCAAAGTTACTTTACGTAAATTAGGTGTAAATCCAGCTACTCAAAATCGACGTAGTAAGCAACGGGCTACA AGTGCTGAAGGAACCCCAACTTTAGATTCAGTTGCACGAGACTTGACGGCGATGGCTGCTGAAGGAAAAATTGATCCAGT GGTGGGGCGGACAAAAGAAGTTCGTCGCGTAATCCAAATTTTAAGCCGACGGACTAAGAACAATCCAGTATTGATTGGTG AACCAGGAGTTGGGAAGACGGCGATTGCCGAAGGATTAGCTCAAAAGATTATCGATCAAGATGTTCCAACTGATATGCAA AATAAACGATTAATGATGCTAGAGATGGGTTCTTTAGTGGCGGGAACTAAGTACCGTGGTGAATTTGAAGATCGTTTAAA AAAGGTGATTGAAGAAATTCGCAATGATGGTCAAGTGATTGTCTTTATCGATGAGTTACACACGTTAATTGGAGCTGGCG GGGCTGAGGGAGCCATTGACGCTTCTAATATCCTAAAACCAGCTTTAGCTCGTGGCGAGCTACAAACGATTGGTGCAACT ACTTTAACAGAATACCAAAAGTATATTGAAGCTGATGCTGCTTTGGAACGACGTTTTGCTAAAGTGGAAGTTGATGAACC TACGGAAGCTGAAGCAGTTCAAATTTTAAGAGGAATTCGTCCTAAGTATGAAGAACATCATCAAGTTAAAATTTCAGATG ATGCCATTCAACAAGCAGTTACTTTATCATCACGTTATATTGCAGACCGTTTTCTTCCCGATAAGGCCATCGATTTAATC GATGAAGCGGCTGCTAAAATTCGAATCGATGCCTCTGAGAAGCAAGTGAAAAAAGTTACGGATGAAGATCGATTAGAAAA ATTACGAACAGCTAAAGAAGAAGCGATTGATAATCAAGATTTCGAAAAGGCTGCCGACATCCGTAAGAAAGAAATGAAGT TACGCCGTAAGATTGAGCGTGCTGAAAATAACCCAGAAACCAATGAAGCTAAAAAAGATTATAAATTAATTGAAAATGGC GAAGATATTGCGCAAATCGTTTCAGATTGGACTGGTGTACCTTTAACGCAGATGAAACAATCTGAGTCAGATCGCTTGAT TAATTTAGAGAAAACTTTGCACGAACGAGTAATTGGTCAAAAAGAAGCCGTTTCGTCAGTAGCTCGAGCTATTCGCCGTG CGCGTTCAGGTTTGAAGAGCCCTAAGCGACCAATTGGTTCTTTTATGTTCCTTGGTCCTACAGGGGTTGGTAAAACAGAA CTGGCTAAGTCTTTAGCAGATATTATGTTTGGTTCGGAAGATAATATGATCAGAATTGATATGTCTGAGTATATGGAACG TTACAGCACTAGTCGTCTAGTTGGATCAGCACCAGGTTATGTGGGTTACGACGAGGGTGGACAATTGACTGAACAGGTTC GTCGGAAACCATACTCAGTTGTTTTATTTGATGAAGTAGAAAAAGCTCATCCAGATGTCTTTAATTTGTTACTTCAAGTT TTTGATGATGGTTTTCTAACTGATTCTAAGGGCCGACGAGTTGATTTTAGAAATACTATTATCATTATGACGTCTAACTT GGGAGCTACAGCATTGAGGGATGAAAAATCAGTCGGCTTTGGTGCTCAAAATGCAGCTGAAGATTACCATGCTATGGCAG ATAAAGTACGTGAAGTTTTGAAGCAGAGTTTCCGTCCCGAATTCCTCAACCGGATTGACGAAACCATTATTTTCCATTCA TTAACGAAACCTGAACTCCATCAAATCGTTAAATTGATGGCTAAAGATGTCATTCAGCGGATGAGTGAGCAGGGAATTAA TGCCAAGTTTACTCCTAGTGCAATTGATGTGGTGGCTGAAGCTGGATTTGATCCTGAATATGGGGCACGTCCATTGCGTC GAGCCTTACAAACTAAGGTTGAAGACCAATTAAGTGAATTAATGTTGTCCGGTGAAGCTAAGGTTGGTGACGATATTACG ATCGGAGCGCGCAACGGAAAAATTAATTTAAAAGTTAAAAATAAAACATTAATAAAAAATAAATAA Protein sequence : MENLFTPSARNALVIAQEQAKRFKHPAVGTEHLLLALAIETNGVARSVLGQFNVTEVDVAEEIEQFTGYGNLRTVKDDYL PYSPKASEILVNAQEQAKQLNAIKIGTEHLLLALVQNDNILSSRILLALDTDIAEVRKVTLRKLGVNPATQNRRSKQRAT SAEGTPTLDSVARDLTAMAAEGKIDPVVGRTKEVRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIDQDVPTDMQ NKRLMMLEMGSLVAGTKYRGEFEDRLKKVIEEIRNDGQVIVFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGAT TLTEYQKYIEADAALERRFAKVEVDEPTEAEAVQILRGIRPKYEEHHQVKISDDAIQQAVTLSSRYIADRFLPDKAIDLI DEAAAKIRIDASEKQVKKVTDEDRLEKLRTAKEEAIDNQDFEKAADIRKKEMKLRRKIERAENNPETNEAKKDYKLIENG EDIAQIVSDWTGVPLTQMKQSESDRLINLEKTLHERVIGQKEAVSSVARAIRRARSGLKSPKRPIGSFMFLGPTGVGKTE LAKSLADIMFGSEDNMIRIDMSEYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEVEKAHPDVFNLLLQV FDDGFLTDSKGRRVDFRNTIIIMTSNLGATALRDEKSVGFGAQNAAEDYHAMADKVREVLKQSFRPEFLNRIDETIIFHS LTKPELHQIVKLMAKDVIQRMSEQGINAKFTPSAIDVVAEAGFDPEYGARPLRRALQTKVEDQLSELMLSGEAKVGDDIT IGARNGKINLKVKNKTLIKNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PEPE_1427 | YP_804906.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 56 |
| PEPE_1427 | YP_804906.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 2e-143 | 49 |
