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Name : LBJ_4174 (LBJ_4174) Accession : YP_802319.1 Strain : Genome accession: NC_008511 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 201364 - 203256 bp Length : 1893 bp Strand : - Note : inner membrane protein DNA sequence : ATGCTCGGTCGGTGGAATCGAAGAATGTGGATTTTTCCTTTAGATCTGTTGTTCATGGGAATTTCCTATTTTTTGGCGCA TTGGATTCGCTTTGAGTCTTTTATTTTTCTTTCGTCACCGGAAAGATTTTTTACCTCTTTGATCATTGTCATTAGCGTCA GGGCCTGTGTTTTCATTCTCTCCGATATTTACAGGTCCATTTGGGTTTACGCTTCGATACACGATCTTGTGGAAATCATC AAGGTCACACTTCTCTCCTCTCTAATTTCAACTACGGCACTCTTATTTTACAATCGTTTCGAACAACTTTCCAGAATGGT TCCCGTTTTGGACACGCTCCTTCTACTCAGTTTTCTTTGTATTCGTAGTTTTTCCTGGAGAGTATTTCGGGATCAGTACA TTCTCAAAAAATCCAAGGAAGAAGGTCTTCCGACACTGATTCTGGGGGCCGGAAAGATAGGTGCGACTCTGCTTTCGGAA ATTCGAAGACACAACGAACTCAAACTCAATCCAATCGGATTTTTAGATGATAACGTCCAGAAAATCGGAGCGCATATCCA AGGGGTTCCGATTCTGGCAAAAATCGACCAAGCGGAACAAATGATCAATCGTTTCGGAATAAAACAAGTCATCATCGCCA TCTCCAATCCGGACGGAAAACTCATCAGTCGGTTGATTCGTTCTTTTGAGAGTACGGATGTGAAGTTTAAAATTCTTCCT TCTTTGGGCTCTTTGTTTTTTGATTCTCCCAAATTAAATCAACTCAGAGAGGTGCAGGTGGAAGACCTTTTGGGTCGTCC GGTTGTGGATCTTGAAGTCGAGTCCATTCGTTCCTATCTAAAAGGGAAATCGATTTTGATTACAGGAGCGGGAGGTTCGA TCGGAAGCGAACTCTGTCGGCAGGTTGCCGTTTTTGAACCGTCTCGAATTCTTCTTTTGGATGCGGCGGAAACACCGTTG TACGAAATCGAATACGAGCTTGGAAAAAAATTACAAGGACAAAATATAGAACTCGTTCCAATCGTCGCGGATATCAAAAA TCTTTCCAGAGTCAGTTCTATTTTTGAAAAACATTCTCCCGAAGTTGTATTTCATTCGGCCGCTTACAAGCACGTTCCGA TGATGGAAGTCAACCCGACCGAAGCAGTGATGAATAACGTGTTGGGCACAAAAAACGTCGCCGATATTTCCAGGCTTTCG GGGGTGGAACGTTTTGTTTTAATCTCCACGGATAAGGCGGTCAATCCCGTGAACATTATGGGCGCTTCCAAACGTGCGGC GGAATTGTATTTACAACATGTTTCCCGAGAAACAAAAACCAAGTTTATTACGGTTCGATTCGGAAATGTTCTCGGTTCCA ACGGATCTGTGATTCCAAGGTTTAGGGAGCAAATCGCAAACGGTGGTCCGGTTACCGTCACACATCCCGATGTAATCCGT TATTTTATGACAATTCCGGAAGCGACTCAGTTAGTTCTCCAAGCTGGAAGTATGGGAGAATGCGGAGAGATCTTTATACT TGAGATGGGGGAGCCAGTAAAAATTCTCAACTTAGCGGAAGAGATGATTCGCCTCTGCGGTCTCAGACCTCATGTGGATA TACCGATTCAGTTCACCGGACTCAGACCGGGGGAAAAATTATTCGAAGAACTTCTTTTAGATCTGGAAGGAATTAAAAAA ACTCATCATCCTAAGATCAAAATCGCCGCGCCCTTGGAAAATCAGGAAGTGACTACTTTTGTTGCAAGATTCAACGAACT TTTGACTGCAGGAAGGATGAACAAGGATATCTTTCTCGCTTTTAAGACTTTGGTTCCGGAATACAAGATCCACGGAGATT ATTTGAATGAAGCCGTCACGGAAATTTCCGATCAAAATTTGAAGAATGGATAA Protein sequence : MLGRWNRRMWIFPLDLLFMGISYFLAHWIRFESFIFLSSPERFFTSLIIVISVRACVFILSDIYRSIWVYASIHDLVEII KVTLLSSLISTTALLFYNRFEQLSRMVPVLDTLLLLSFLCIRSFSWRVFRDQYILKKSKEEGLPTLILGAGKIGATLLSE IRRHNELKLNPIGFLDDNVQKIGAHIQGVPILAKIDQAEQMINRFGIKQVIIAISNPDGKLISRLIRSFESTDVKFKILP SLGSLFFDSPKLNQLREVQVEDLLGRPVVDLEVESIRSYLKGKSILITGAGGSIGSELCRQVAVFEPSRILLLDAAETPL YEIEYELGKKLQGQNIELVPIVADIKNLSRVSSIFEKHSPEVVFHSAAYKHVPMMEVNPTEAVMNNVLGTKNVADISRLS GVERFVLISTDKAVNPVNIMGASKRAAELYLQHVSRETKTKFITVRFGNVLGSNGSVIPRFREQIANGGPVTVTHPDVIR YFMTIPEATQLVLQAGSMGECGEIFILEMGEPVKILNLAEEMIRLCGLRPHVDIPIQFTGLRPGEKLFEELLLDLEGIKK THHPKIKIAAPLENQEVTTFVARFNELLTAGRMNKDIFLAFKTLVPEYKIHGDYLNEAVTEISDQNLKNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 8e-89 | 45 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-86 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LBJ_4174 | YP_802319.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 2e-88 | 44 |
