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Name : thiC (LBJ_0403) Accession : YP_799877.1 Strain : Genome accession: NC_008510 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 493164 - 494699 bp Length : 1536 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGGAGTCCACTCAAGAATTTCAAGTCCCTCTGAAAACGATTCGTCTTACCGACGGGACCGAATATCAATCGTATCATAC GGAGGGTTCGCTTTCTGACAAGAAACCTTCCGATTATAAAAACGGAATCCCAAAAATAAGGAAAGAATGGATCCGGACAC GCCTCGATCGGGGTGATACGAATCATTCTCAGATGTATTATGCGAAAAAGGGAATCATCACCGAAGAGATGCGTTATGTG GCCCTTCGGGAAAATATGAATCCCGAGTTCGTTCGTTTGGAAATCGCGTGCGGTCGCGCCATTCTTCCTTCCAATCGAAA CCATCCCGAACTTGAACCGATGATCATTGGTAGGAATTTTCTCGTAAAGATCAATGCGAATATCGGAAACTCAGCGCTCG GCTCCTCCATCGAAGAGGAAGTCGAAAAATTGCATTGGGCGGTCAAGTGGGGCGCGGACACGGTGATGGATCTTTCCACC GGAAAAAACATCCACGAAACGAGAGAATGGATCCTCCGAAATTCTCCCGTGCCAATCGGAACGGTTCCGATCTATCAAGC CCTTGAAAAGGTAAAAGGAAAAGCGGAGAATTTGAATATTCAAGTTTTCTTAGATACTTTGGAGGAACGAGCCGAACAAG GAGTGGATTATTTTACGATTCATGCTGGAGTTCTTCTGCATTATATTCCTTTTACCGCAAACCGCGTGACCGGGATCGTA TCGAGAGGGGGATCGATTCTTGCAAAATGGTGTTTGGCGCATCATAAGGAGAATTTTCTTTATACGCATTTCGACGAAAT TATAAAGGTGATGAAAAAATACGGTGTTTCCTTTTCTCTCGGAGACGGATTGCGTCCCGGTTCGATTGCGGATGCAAACG ACAAGGCGCAATTCGGAGAACTCGAAACCTTGGGCGAATTGACAAAACGTGCCTGGGAAGAAGATATTCAGGTGATGATC GAAGGACCGGGTCACGTTCCTATGCATCTCATCAAGGAGAATGTCGATCTTCAGATGAAACTCTGCCAAGAAGCCCCGTT TTACACGTTAGGCCCTCTTGTTACCGATATCGCTCCGGGTTACGACCATATCACTTCCGCGATCGGTGCGGCGATGATCG GATGGTTCGGAATGGCTATGCTCTGTTATGTGACTCCGAAAGAACACTTGGGACTTCCCGATAAGGAAGACGTCAAACAA GGAGTGATTGCGTATAAGATCGCGGCTCATGCGGCCGATCTGGCAAAGGGACATCCGGGCGCGATCAAGCGGGACAATCT TTTGAGCAAGGCCCGTTTCGAATTCCGTTGGGAGGATCAGTTCGCGCTTTCCCTCGATCCCGAAACCGCGAAGTCCTTTC ATGACGAGACTCTTCCGCAGGATCGAATGAAAACCGCGCATTTCTGTTCTATGTGTGGTCCTCATTTTTGTTCGATGAAC CTGACCCAAGAACTCCGAAAGTTTGCGCAGGAGAAGGGAATGGAAGAAAAGTCCGAGGTAACAATTTGTAATCGAAAAAA AGAATCAGGAAAGTGA Protein sequence : MESTQEFQVPLKTIRLTDGTEYQSYHTEGSLSDKKPSDYKNGIPKIRKEWIRTRLDRGDTNHSQMYYAKKGIITEEMRYV ALRENMNPEFVRLEIACGRAILPSNRNHPELEPMIIGRNFLVKINANIGNSALGSSIEEEVEKLHWAVKWGADTVMDLST GKNIHETREWILRNSPVPIGTVPIYQALEKVKGKAENLNIQVFLDTLEERAEQGVDYFTIHAGVLLHYIPFTANRVTGIV SRGGSILAKWCLAHHKENFLYTHFDEIIKVMKKYGVSFSLGDGLRPGSIADANDKAQFGELETLGELTKRAWEEDIQVMI EGPGHVPMHLIKENVDLQMKLCQEAPFYTLGPLVTDIAPGYDHITSAIGAAMIGWFGMAMLCYVTPKEHLGLPDKEDVKQ GVIAYKIAAHAADLAKGHPGAIKRDNLLSKARFEFRWEDQFALSLDPETAKSFHDETLPQDRMKTAHFCSMCGPHFCSMN LTQELRKFAQEKGMEEKSEVTICNRKKESGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 8e-156 | 68 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 4e-169 | 66 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 4e-169 | 66 |
