|
Name : gspE (LBJ_1420) Accession : YP_800752.1 Strain : Genome accession: NC_008510 Putative virulence/resistance : Virulence Product : Type II secretory pathway ATPase, protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1684504 - 1686177 bp Length : 1674 bp Strand : - Note : cytoplasmic protein DNA sequence : TTGAAAACTCTCGGAGATATCCTAATCGAAGAGGGGATCATATCCGAAAAAGATCTGGAAGATTCCCTTAAGGTTCAGAA GAAAAATAACCTTCCGCTCAGTCATATCATTCAGAAAAAAGGAATCGCCGGAGAAACCGATATTCTCCGTGCCTTATCCA AACTCTATCAGTTTGAATTCAGGGAAAAACTTGAATTTACGGGAATAGAAGACGTATTTTTACAAATTCCGTTGAAACTC ATTCAAAAAAGCAGGATCGTTCCATTTCAACTTTCCAAAAAGACGATTCGAGTCGCCGTGTCCGATCCGTCCGATCTGCA TCCGATGGACGACGTGCGGAATTTCTTAAAAGGATATAACGTAGAATTTGTTCTCGCTCCGGAGCCGGAGATCATGAGAA TCATCCATTCTCAGTTTGATACTACCTCTTCATCAGCAAAAGAAATGCTAAATGAAATGGAGGGAAGTTTTTCGGAACTT GCGGAAGCTTTTGAAAACGAAACTCTAGATTTAAGCGACGACGCCCCTATCATCAAAATGGTAAATGTGATTCTTTCGCA GGCCGTCAACGAAAGAGCTTCCGACATTCACATCGAGCCGTATGAAAAGTCACTCGTGGTTCGTTACAGGGTGGATGGTA TTTTGCATAACGTTCTTAGTCCTCCCAAATCCTATCACGCCGGAATTTCTTCCAGGATCAAGATCATGTCGAATCTGAAT ATCGCAGAGAATCGACTTCCTCAAGACGGGAGAATTAAGCTCAGACTTGTTGGAAAGGACATCGATATCCGGGTTTCTAC GATTCCTTGTCAGTTCGGAGAAAGGATCGTTATGAGGCTTTTGAACAAAACGGATCAAAAGTATTCTTTGGATACGATGG GTTTTTATCCCGATCTCATCAAATCGCTTCGTTCTCTAATCTACGAACCTCATGGAATCGTTCTCGTTACGGGACCGACC GGATCGGGAAAATCCACCACACTCTATTCGGCGCTCAGCGAACTGAACACAGAAGAAAGAAACATCATCACTTGTGAAGA TCCCGTAGAGTATCAGATCGAAGGAATTTCTCAGATGCAAATGCAGGAGAAAATCGGTCTTACGTTTGCTACCGGTTTAA GAGCGATCTTACGACAAGACCCGGATGTGATTATGGTGGGGGAGATTCGAGACGAGGAAACCGCGAGGATCGCGATCCAG GCTTCTCTTACGGGGCACCTTGTGTTTTCCACATTGCATACGAACGACGCGGCCAGTGCGGCGACTCGTTTGATCGATAT GGGAATCGAACCGTATCTTATCACTTCCACGGTTTTGGGTTTTATGGCTCAGAGACTTGTACGTGTCATCTGCACTCAAT GTAAAGAGATTTACAAACCCACCGCTTCGGAATTGGAATCGATTGGAATTTCTAGGAAGGCTTTAAAAAACGGAAGCTTA CACAGAGGTAAGGGTTGTTCTCATTGTATGGGAACCGGTTTTAAAGGAAGAACGGGAATCTACGAACTTTTGTTAGTGAA TTCTCACATTAAACATGCGATCCTGCAAGGTAAGGATGCGGGTCAGTTAAACGAGATCGCGCTCGAACATAATTTCCAAA CTCTAAAAGATTACGGAGTCAAAAAGGTAATCGACGGAGTAACTACGATCGACGAAGTCCTCAGAGTAACCTAA Protein sequence : MKTLGDILIEEGIISEKDLEDSLKVQKKNNLPLSHIIQKKGIAGETDILRALSKLYQFEFREKLEFTGIEDVFLQIPLKL IQKSRIVPFQLSKKTIRVAVSDPSDLHPMDDVRNFLKGYNVEFVLAPEPEIMRIIHSQFDTTSSSAKEMLNEMEGSFSEL AEAFENETLDLSDDAPIIKMVNVILSQAVNERASDIHIEPYEKSLVVRYRVDGILHNVLSPPKSYHAGISSRIKIMSNLN IAENRLPQDGRIKLRLVGKDIDIRVSTIPCQFGERIVMRLLNKTDQKYSLDTMGFYPDLIKSLRSLIYEPHGIVLVTGPT GSGKSTTLYSALSELNTEERNIITCEDPVEYQIEGISQMQMQEKIGLTFATGLRAILRQDPDVIMVGEIRDEETARIAIQ ASLTGHLVFSTLHTNDAASAATRLIDMGIEPYLITSTVLGFMAQRLVRVICTQCKEIYKPTASELESIGISRKALKNGSL HRGKGCSHCMGTGFKGRTGIYELLLVNSHIKHAILQGKDAGQLNEIALEHNFQTLKDYGVKKVIDGVTTIDEVLRVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-107 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-107 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_800752.1 | Type II secretory pathway ATPase, protein E | VFG0182 | Protein | 9e-107 | 48 |
| gspE | YP_800752.1 | Type II secretory pathway ATPase, protein E | VFG2048 | Protein | 4e-107 | 47 |
| gspE | YP_800752.1 | Type II secretory pathway ATPase, protein E | VFG1876 | Protein | 5e-95 | 45 |
