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Name : clpA-3 (LBL_0301) Accession : YP_796845.1 Strain : Genome accession: NC_008508 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 356579 - 359122 bp Length : 2544 bp Strand : + Note : cytoplasmic protein DNA sequence : ATGCTGGAATTTACGAAACGAGCCAAAAGAGTTATCAATGAGATTGCTCAGGATGAGGCGAAGCGTCTTGGTAGCGACTA TATCGGGCCGGAGCACATCCTGCTTGGTCTTCTGAAAGAAGAAGATTCGGTTGCTATCAAAATCCTGAACAACCTCAACA TTAACCTCAACGAATTACGAAAAGAGGTGGAGAGAAGAACACGGGAAGCTTCAGGAGCCTTGCTCATGGATGTGGCCGGA GGTCAGGATCGTTATCAAAAAATCATCGAACTTTCTAAAGAAGAGGCTAAACGTCTCAAGCACAATTACGTGGGAACGGA GCACATCCTTCTTGCATTGTTAAGAGATAACAACAATATAGCAGGTGGCGCGCTTTATTCTTTTAGCGTAAATTATAATG TTATAAAGAGCGAAATTTTGCGTTTACTCGGAGCTCCTCCTACTAGTTCCGTTGGTGTAAGCTCTGCCGCCCAATCTGGG CCACAAGGGACCACGTCTCGTCAGGAGAAAACAAAAACTCCGATCTTAGACGAATTTGCGCGCGACCTGACCCAGCTTGC AAGAGATAAGAAGCTGGATCCGGTCGTAGGAAGAGCTACTGAAATTCAGAGAGTGATCCAGATTCTTTCCAGGAAAACCA AAAACAATCCTGTTCTCGTGGGAGAATCCGGAGTCGGTAAAACCGCAATCGTGGAAGGGTTGGCACTTGCGATCGTAGAA AAAAGCGTTCCTGATCTATTGTTCGAAAAAAGAGTTCTTTCTTTGGATCTTGCGTCCTTAATTGCAGGAACCAAATACAG AGGGGAATTTGAAGAACGTCTGAAAAAAATTATGAAGGAGATTACTTCTTCCACGAATATTATCATTTTGATCGACGAAC TTCACACTCTGATCGGAGCAGGCGCCGCGGAAGGAGCTGTTGATGCGGCGAATATTCTCAAACCTGCTCTTGCAAGAGGA GAACTTCAATGTATTGGTGCGACTACAAGTGCGGAATACCGGAAATACATTGAAAAAGATTCCGCGTTGGAAAGAAGATT TCAAGTCGTGAAAGTTGCGGAACCTTCCGTGAGTGACACGATTCAAATTCTCCAAGGCCTTAAGAAAGCTTATGAAACTC ATCATAAAGTGCGATACTCCGATAAAGCGTTGGAACAATCCGTAAAACTTTCTCACAGATATATCAACGATCGATATCTA CCCGACAAAGCGATCGATATCATTGACGAAGCGGGAGCAAAGGCCCGTTTAGCGAACTGTGCGCGTCCTCAAACGATCAA AGATTTGGAAGAGGAAATTAAATCACTTGCCTCTAAAAAAGAGGAATTGGTTCGTGCCCAAGAATACGAGAAGGCCGCAG GTGTTCGTGATGAAGTAAATCGGAAAAAACAGGCGATGGAAGAAAAAATTCGCGCTTGGCAAGAGAAGATGGAAGATTTT GCGGTCAATATCGATGAAGACGATATTCTTTCCGTAGTATCTTTGTGGACTGGAATTCCTTTGGAGAAAATGGAAGAATC CGAATCGGATAAACTTCTTCGTTTGGAAGACGAGTTGAAAAAACGAATCGTCGGTCAGGAAGAAGCGATCGAAAAAATCG CAAAAGCGGTTCGCCGTGCTAGAACCGGATTCAAAAGCGAAAGACGTCCTACCGGGTCTTTTATTTTCTTAGGACCTACT GGAGTCGGCAAAACCGAGCTTGCAAAAGCGCTTGCAAATTTCCTTTTCGGAAATGATGATGCTATGCTTCGTGTGGACAT GTCCGAATATATGGAGCCACACGCGGTAAGTCGTCTGATCGGAGCTCCACCGGGTTACGTGGGATATGACGACGGAGGTC AATTGACTGAGTTCGTCAGAAAGAGACCTTATTCCATTATTCTTTTGGACGAAATTGAAAAAGCGCACCACGACATTTTC AATATTCTCCTCCAAATTATGGAAGAAGGAAACTTGACTGATACGAAAGGACGGAAAGTAAACTTCCGAGACACAATCAT CATCATGACTTCCAACATTGGTGCCAAAGAAATCCAAGCCGGAGGAAGACTCGGATTCGAAGATCGCAAAGACGAAGCTT TGAAATACAAATCGGATCAGACACGCGATCAATTGAAAAAGTATTTCAATCCCGAGTTCTTAAATCGTGTGGATGAAGTT ATCTATTTCGGTTCCCTCACCAAGGAAAATATCATGTCCATCATCGATATTATGGTGACCGATACGAACAAAAGACTTCG TGAAAAAATGATTCAAGTTTCCGCTACTCAAGCGGCAAAGGATCATATCATGGACATCGGTTATGATGAGAAGTTTGGCG CAAGGCCTCTTCGAAGAGTTTTCCAAAGAGAATTGGAAGATCATATGGCGGTACAAACGCTTAAAGGAGCTTATAAGGAG CCTACAAAAATTGAAATCGATTTCAAAGAAGGTAAGCTTGAGTTTATAGAGACTCCATGGACGGATTATAAACCGGCCGA GGCCGGAGGAGACGACAATTCTTCCGGTAATCCCGAAAGGTCGGAAGAGATTGCCTTAGTCTAA Protein sequence : MLEFTKRAKRVINEIAQDEAKRLGSDYIGPEHILLGLLKEEDSVAIKILNNLNINLNELRKEVERRTREASGALLMDVAG GQDRYQKIIELSKEEAKRLKHNYVGTEHILLALLRDNNNIAGGALYSFSVNYNVIKSEILRLLGAPPTSSVGVSSAAQSG PQGTTSRQEKTKTPILDEFARDLTQLARDKKLDPVVGRATEIQRVIQILSRKTKNNPVLVGESGVGKTAIVEGLALAIVE KSVPDLLFEKRVLSLDLASLIAGTKYRGEFEERLKKIMKEITSSTNIIILIDELHTLIGAGAAEGAVDAANILKPALARG ELQCIGATTSAEYRKYIEKDSALERRFQVVKVAEPSVSDTIQILQGLKKAYETHHKVRYSDKALEQSVKLSHRYINDRYL PDKAIDIIDEAGAKARLANCARPQTIKDLEEEIKSLASKKEELVRAQEYEKAAGVRDEVNRKKQAMEEKIRAWQEKMEDF AVNIDEDDILSVVSLWTGIPLEKMEESESDKLLRLEDELKKRIVGQEEAIEKIAKAVRRARTGFKSERRPTGSFIFLGPT GVGKTELAKALANFLFGNDDAMLRVDMSEYMEPHAVSRLIGAPPGYVGYDDGGQLTEFVRKRPYSIILLDEIEKAHHDIF NILLQIMEEGNLTDTKGRKVNFRDTIIIMTSNIGAKEIQAGGRLGFEDRKDEALKYKSDQTRDQLKKYFNPEFLNRVDEV IYFGSLTKENIMSIIDIMVTDTNKRLREKMIQVSATQAAKDHIMDIGYDEKFGARPLRRVFQRELEDHMAVQTLKGAYKE PTKIEIDFKEGKLEFIETPWTDYKPAEAGGDDNSSGNPERSEEIALV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-180 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA-3 | YP_796845.1 | ATP-dependent Clp protease | VFG0080 | Protein | 5e-148 | 53 |
| clpA-3 | YP_796845.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 52 |
