|
Name : LVIS_0906 (LVIS_0906) Accession : YP_795072.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 933030 - 934496 bp Length : 1467 bp Strand : - Note : - DNA sequence : ATGCGTGAAGATTTGAAAAACTCAGCGGGCCAACCGTGGGGAGATAATGAACACTCTCTGACGGCTGGACAACGCGGGCC TGTTCTCATACAAGATTATAATTTATTGGAAAAGTTGGCGCACTTTAACCGCGAACGGATTCCAGAACGGGTGGTTCACG CCAAAGGTGCCGGTGCGGAAGGTACTTTTCGACTAACTAAAGATATGCATCAATATACCAAGGCCAAGATTTTTACTGAG ATGGGGAAATCAGTTCCCATGCGGATTCGCTTTTCTCAAGTGGCCGGAGAAATGGGCTCAGCAGATACAGTTAGAGATGT CCGGGGGTTCGCACTCCGGTTTTACACAGATGATGGAAATTACGACATCGTGGGAAACAATACACCGGTATTCTTTGTCA ATGACCCATTGAAGTTTCCAGATTTTATTCATTCACAAAAGCGTGATCCGCGAACACACGAGCGTTCACAAGATATGCAA TGGGACTTCTGGGCCCACTCACCCGAATCGGTTCACCAAGTCACGATTCTGATGAGTGATCGGGGGATTCCGGCTTCCTA CCGTAAGATGCATGGTTATGGGTCTCACACATTCAAATGGGTGAATGAAGCGGGTGAAGTCTTTTGGGTGAAGTATCATT TCCGGACGGCCCAAGGCATTCAGAACTTATCCAACGACGTCGCTCAGCGTCTAGCCGGAGAGAACCCTGATTACCTGCAA GCTGATTTATATCACGCGATTGAAGCCGGCGATTTTCCAACCTGGAAAGTTTGTGTACAGGTGATTCCTGAACAGGCAGG TCTCGATTATCCAGCTGACATTTTTGATGTGACGCAAGTAGTTTCTCAAAAAGATTATCCGTTGATTGAGATTGGTGAGT TCACACTAAATAAAAATCCCGATAATTACTTTGAAGGCGTTGAGGAAGCTGCCTTTTCACCGGCTAATTTGGTACCCGGA ATTGAACCTTCCCCCGATAAGTTATTGCAGGGTCGGCTGTTTGCTTATAAGGACGCAGCACGTTACCGGTTAGGGGTTAA CTACGAGCAGTTGCCAGCTAATCGACCACTTAACCATCCGAATAATTATGAGCGCGATGGGTTCATGCAAACGGATAATC ACGGGGATCAAGTTAACTATGAACCGAATAGTCAGGGGGGCCCGCAAGAAGATCCTGCTGGTCGGCTGACACCATACACT GTTTCTGGAAAGGCCGGTAACTATGCCTATCAAACAGATTATGGTCGGGCCGCTGGAAAACTTTACCGTTTGTTACCAGC CGATGAACGACAACGGTTAATTGAAACCATTGTCATGAATCTGGGACAAGTTAAGAGCCATGACGTTAAGCGATTAGAGA CGGCTCAGTTCTATGAAGCAGATCATGATTATGGGTTGGCGGTTGCCAAAGGGCTGGGCCTAAAGTTAGATGAAATTAAG GACTACCCATTTGATACAACGCACTAG Protein sequence : MREDLKNSAGQPWGDNEHSLTAGQRGPVLIQDYNLLEKLAHFNRERIPERVVHAKGAGAEGTFRLTKDMHQYTKAKIFTE MGKSVPMRIRFSQVAGEMGSADTVRDVRGFALRFYTDDGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHERSQDMQ WDFWAHSPESVHQVTILMSDRGIPASYRKMHGYGSHTFKWVNEAGEVFWVKYHFRTAQGIQNLSNDVAQRLAGENPDYLQ ADLYHAIEAGDFPTWKVCVQVIPEQAGLDYPADIFDVTQVVSQKDYPLIEIGEFTLNKNPDNYFEGVEEAAFSPANLVPG IEPSPDKLLQGRLFAYKDAARYRLGVNYEQLPANRPLNHPNNYERDGFMQTDNHGDQVNYEPNSQGGPQEDPAGRLTPYT VSGKAGNYAYQTDYGRAAGKLYRLLPADERQRLIETIVMNLGQVKSHDVKRLETAQFYEADHDYGLAVAKGLGLKLDEIK DYPFDTTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-98 | 57 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-94 | 56 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-94 | 56 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-94 | 56 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-94 | 56 |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-107 | 52 |
