Gene Information

Name : LVIS_0887 (LVIS_0887)
Accession : YP_795055.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Resistance
Product : protein-tyrosine-phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 913907 - 914305 bp
Length : 399 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACGGCTTTATTTTTTGTGTACAGGAAATTCCTGTCGCAGTCAGATGGCAGAGGGGTTAGCCCGTGATTTACTAGA
TCCCAGTTGGTACGTTGCAAGTGCCGGAATAGAAGCGCATGGCCTAAACCCACTAGCCGTTCAGGTGATGGCTGAGATTG
GCATTGATATTTCGCAGCAGACGTCAACGGTCATTGATCTTGGTTATTTAAGACAGTGTGATTTGGTCGTGACGTTGTGT
GGCGATGCGCGGGATAGATGCCCCGTGACCCCAGCCACGGTTAAGCGAATTCACTGGCCACTAGCTGATCCAGCTCAGGC
TACAGGAAGTGTGGCCGAACGTTTATTAATTTTTCGGCAGGTTCGTGATGAAATTGCTAGGCATATTAAAGAAATTTAG

Protein sequence : 
MKRLYFLCTGNSCRSQMAEGLARDLLDPSWYVASAGIEAHGLNPLAVQVMAEIGIDISQQTSTVIDLGYLRQCDLVVTLC
GDARDRCPVTPATVKRIHWPLADPAQATGSVAERLLIFRQVRDEIARHIKEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 2e-29 53
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 4e-28 53
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-29 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_0887 YP_795055.1 protein-tyrosine-phosphatase BAC0581 Protein 4e-35 62
LVIS_0887 YP_795055.1 protein-tyrosine-phosphatase BAC0580 Protein 3e-29 56
LVIS_0887 YP_795055.1 protein-tyrosine-phosphatase BAC0032 Protein 7e-29 53