|
Name : hslU (LVIS_0801) Accession : YP_794975.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 829103 - 830533 bp Length : 1431 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGAACGGGGGATTTACCGTGGACGCAATTGATAAAACACCAAAAGAAATTGTCGGCTTATTAGACCAATATGTGATTGG CCAAGATGAAGCCAAAAAGGCGATTGCCATTGCCTTACGTAACCGTTACCGGCGGATGCAACTTGATCCCGCCATGCAAG AAGAGATTTCACCTAAGAACATGTTAATGATTGGACCGACCGGGGTCGGGAAAACTGAAATTGCTCGGCGATTGGCCAAG ATCGTCCACGCACCTTTCACGAAGGTTGAAGCTAGTAAGTTCACGGAGGTCGGCTATGTCGGTCGTGACGTCGAATCAAT GGTCCGTGACCTAGTCGAAGTCTCCGTTAGCATGCAAAAGCAAGATCAATTTAAAAATGTTCGGGCTGATGCGACCCAAG CGGCCAATAAGCGTTTGGTCAAGCTACTCGCACCAGCCAAGAAAAAAGAAAATAAGAACAACAATGATTTTGCCAATATG ATGAATATGTTTACCCAGATGCAAAACGGGCAAACACCAACGGCGCCAAATGATCAAGAGGAAGTCACCGATGAGATTCG TAATGAACGCTTATCGCTGACGGAACAACTGAATCAAGGACTACTCGAAAACCACATGGTGGAAATCGAGATGGATGATC CCCAACAAGCCAATGCGACAGATAACAACATGCTGGGCCAAATGGGCATCGACCTAAATGACACGTTAGGGTCCATCATG CCGAAGAAGCGGATCAAACGAACGGTAACGGTTGCCGAAGCTCGTGAGATTCTGGTGGCTGAGGAATCCGAAAAGTTGGT CAACAACGCTGATATCAATCATGATGCGATTAAGCGGGCCGAGAATACGGGGATTATCTTCCTGGATGAAATTGATAAGA TTGCCAAGGGCAGTAGCCAAAATAGTGGTGACGTCTCCCGTGAAGGGGTCCAACGCGATATTTTACCAATCGTAGAAGGT ACCCAGGTTAAGACCAAGTATGGGACCATCGATACGGATCACATTCTCTTCATCGCAGCTGGCGCTTTTGCCGAGTCTAA GCCAAGTGATCTGATTGCAGAATTGCAAGGTCGCTTCCCAATTCGTGTAGAACTCAACGATCTTAGCAAGGCCGACTTTG TTCGCATCTTAACGGAACCAAACAACGCTTTGATCAAGCAATACATTGCGCTGATTGGGACCGATAATGTGAAGGTAACC TTTACCATGGAAGCCATCGAACGAATTGCGGAATTAGCCTTTGAGCTAAACCATGAAAACCAAAACATTGGTGCTCGTCG ATTACAAACGGTCTTAGAAAAACTGTTGGAAGACCTCTTATACGAGGGACCAGACATGGGGACCGGAGATGTCACGATCA CCGAAAGCTATGTTAATGATAAAATCGGTGATATCGTCCAAAACAAGGACCTATCACGGTATATTCTGTAA Protein sequence : MNGGFTVDAIDKTPKEIVGLLDQYVIGQDEAKKAIAIALRNRYRRMQLDPAMQEEISPKNMLMIGPTGVGKTEIARRLAK IVHAPFTKVEASKFTEVGYVGRDVESMVRDLVEVSVSMQKQDQFKNVRADATQAANKRLVKLLAPAKKKENKNNNDFANM MNMFTQMQNGQTPTAPNDQEEVTDEIRNERLSLTEQLNQGLLENHMVEIEMDDPQQANATDNNMLGQMGIDLNDTLGSIM PKKRIKRTVTVAEAREILVAEESEKLVNNADINHDAIKRAENTGIIFLDEIDKIAKGSSQNSGDVSREGVQRDILPIVEG TQVKTKYGTIDTDHILFIAAGAFAESKPSDLIAELQGRFPIRVELNDLSKADFVRILTEPNNALIKQYIALIGTDNVKVT FTMEAIERIAELAFELNHENQNIGARRLQTVLEKLLEDLLYEGPDMGTGDVTITESYVNDKIGDIVQNKDLSRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 1e-95 | 47 |
