Gene Information

Name : LVIS_0701 (LVIS_0701)
Accession : YP_794875.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 729223 - 729981 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGGAATGTCGACACGTTAGTTATCATTATCCACGGCAAAAAGGTGGTCTCACTGCGTTATCTGGCAACTTGCCGACTGG
AAAAATCACCACGATTATTGGCCCGAATGGAGCAGGAAAGTCAACGCTATTACAGCTGTTGGCAAGACAATTGTTGCCTC
AATCCGGGGAGATTCGTTTGGCCGATCAACCGCTGGCTCATTGGACCACCAAACAGCTGGCCCAACGAGTGGCAATGGTC
ACCCAACATCATCAGCTATATGATGAGTTGATGGTTCAGGAGGTTGTTGCCATGGGACGGTTACCATATCATAGCTTATG
GCAAACGGTGCCGTTTCATGAGGTGCAGCCTTATTTGGCGCAAACGGGGTTACTTGCTTTAGCCGATCAGTTCATGCAAG
ATTTGTCAGGTGGTCAACAGCAACGTGCGTGGCTAGCCGCAGCTTTGGCTCAGGAACCGGCCGTTTTGCTGCTGGACGAA
CCGACCACGTATTTAGATGTACACTATCAGCAGACCCTGATGACGCAGTTGCAATCGTTGGCGGCTAAGGGCATGACGAT
TGTTCAGGTGCTACATGACATCAATCAAGCTTTTCGGGTGAGTGACTGGTTGTGGCTATTGAATGATGGTCGTTTGGCCG
CCAGTGGAACTCCGACCCAATTGCGTGATCCACAACTGCTAGAGCGGGTGTTTAATACCGCTGTGGAAGTGGTCACGGTA
CCGCGATTTGGACCTTATATCGTGCAATTGCCTAATTAG

Protein sequence : 
MECRHVSYHYPRQKGGLTALSGNLPTGKITTIIGPNGAGKSTLLQLLARQLLPQSGEIRLADQPLAHWTTKQLAQRVAMV
TQHHQLYDELMVQEVVAMGRLPYHSLWQTVPFHEVQPYLAQTGLLALADQFMQDLSGGQQQRAWLAAALAQEPAVLLLDE
PTTYLDVHYQQTLMTQLQSLAAKGMTIVQVLHDINQAFRVSDWLWLLNDGRLAASGTPTQLRDPQLLERVFNTAVEVVTV
PRFGPYIVQLPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-25 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-20 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-20 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-20 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_0701 YP_794875.1 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component BAC0164 Protein 9e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_0701 YP_794875.1 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component VFG1042 Protein 8e-26 45
LVIS_0701 YP_794875.1 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component VFG0925 Protein 2e-21 41