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Name : secA (LVIS_0627) Accession : YP_794803.1 Strain : Lactobacillus brevis ATCC 367 Genome accession: NC_008497 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 656031 - 658394 bp Length : 2364 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGCCAAATATTTTGAAACGATGGGTCGAAAGTGATCGCCGAACTTTACGACGCCTCAGTAATTTAGCGGATAAAGTCGG CGCCTATGCGGACGACTACGCACAACTTTCAGATGATGATCTGAAAGCGAAAACGCCTGAGTTTAAGCAGCGTTACCAAG ACGGCGAAACGTTGGACGACCTGCTTCCTGAAGCCTTTGCGGCTATTCGTGAAGGTGCTAAGCGGGTGCTTGGCTTGTAT CCTTTCCATGTGCAAATCATGGGGGGCATCGTGCTGCACGAAGGTAACATTGCTGAAATGAAAACCGGTGAAGGAAAAAC CTTGACGGCCACGATGCCCGTTTACCTGAACGCCTTAGCAGGCAAAGGGGTGCACGTAGTAACGGTTAACGAATACCTGT CTGCACGGGATGCTACTGAAATGGGTGAGCTCTATAATTGGATGGGGTTAACGGTTGGATTGAACTCAGCCGAAAAATCA CCAGAAGAAAAGCGAGAAGCTTACCAAGCAGATATTACTTACTCCACCAACGGTGAAATTGGATTTGATTATCTGCGGGA TAACATGGTGGTCTACAAAGAAGATATGGTGCAACGACCATTGAACTTTGCGATTGTCGATGAAGTGGACTCCATCTTGA TTGATGAAGCGCGGACACCATTGATTATTTCTGGTCAATCCGAAGGGACAAGTGCGCTTTATCGGCGTGTTGACCGGTTT GCTAAGACGTTACATGAAAAAGATGACTTTAAGATCGATTTGGAATCTAAGACGGTGGCGTTGACGGATACCGGGATCGA AAAGGCTGAAAAGTACTTCAACTTGAAGAACTTGTACGATACGGACAACACGGCTTTGACCCACCATATGGACCAAGCGT TGCGGGCAAACTTTATCATGCTACGTGACAAGGATTACGTGGTTCAAGATGGTGAAGTCTTGATCGTTGACTCCTTTACG GGTCGGGTAATGGATGGTCGGCGTTATTCTGATGGCCTGCACCAAGCGATTGAGGCTAAGGAAGGCGTCGAGATTCAAGA AGAAACCAAGACGATGGCTAACATCACGTATCAGAACTTGTTCCGGATGTACAAGAAACTTTCTGGGATGACCGGGACGG CTAAGACCGAAGCGGAAGAATTCCGAGAAATTTATAACATGGAAGTTGTTTCCGTGCCAACGAACAAGCCAGTTGTCCGG GTCGATGAACCGGATTTGCTGTACCCAACGTTGGAATCGAAATTTAACGCCGTTGTTAAGGAAATCAAGGACCTACACGA AAAGGGTCAACCGATGTTAATCGGGACCGTGGCCGTGGAAACGTCTGAGTATTTGTCACAACGGTTGGATGAAGAAAACA TTCCGCACGTGGTCTTGAACGCGAAGAACCATGCGAAGGAAGCCGACATCATCCAAAATGCCGGTCAACGTGGGGCTGTC ACCATTGCCACCAACATGGCTGGTCGGGGAACTGATATTAAATTGGGACCGGGCGTCGTGGAAATCGGTGGACTGGCCGT CATTGGGACGGAACGTCATGAGTCACGGCGGATTGATAACCAGCTTCGAGGCCGTTCAGGTCGGCAAGGTGATCCTGGTA TGACGCAATTCTACCTGTCCTTGGAAGATGATTTGATGCGGCGATTTGGTTCTGACCGGGTCAAGAGCTTCTTGGAACGG ATGAACGTTGATGGCGAAGATGCTGTCATTCGGAGTCGGATGATCACTAAGCAAGTTGAATCAGCGCAAAAGCGGGTTGA AGGGAATAACTATGATTCCCGGAAGAACGTGTTGCAATATGATGATGTTATGCGCCAACAACGGGATGTTATGTATGGTG AACGTAACCAAGTCATCAATCAGGATAAGTCGCTGAAGTGGGTATTAATGCCAATGATTAAACGGACCGTTGATCGGGTC GTTAGTCTGCATACGCAAGGTGAACAAAGTGATTGGGATTTGGATACACTCTTAGACTTCGGTATTTCTGCAATGGTCTC ACCAGATAAGATTAGTTTGGATGATCTGAAGAACAAATCAGCCGACGAAATTAAGGCCTTCTTTATGGAACTGGCAGAAG ACGTGTACGCAGAAAAGCAAAAACAACTTTATGATCCAGCACAAATGCTTGAATTTGAAAAAGTGGTGTTACTGCGGGTG GTTGATTCGCACTGGACTGATCACATCGATGCGATGGATCAATTACGGCAATCAATTGGTCTGCGGGGTTATGGTCAGTT GAATCCATTGGTTGAATACCAACAGGATGGGTTCCGGATGTTTGAAGAAATGATTTCAGATATCGACTATGATGCAACGC GCTTGTTCATGAAGTCTGAAATTCGACAGAATATTACCCGTTAA Protein sequence : MPNILKRWVESDRRTLRRLSNLADKVGAYADDYAQLSDDDLKAKTPEFKQRYQDGETLDDLLPEAFAAIREGAKRVLGLY PFHVQIMGGIVLHEGNIAEMKTGEGKTLTATMPVYLNALAGKGVHVVTVNEYLSARDATEMGELYNWMGLTVGLNSAEKS PEEKREAYQADITYSTNGEIGFDYLRDNMVVYKEDMVQRPLNFAIVDEVDSILIDEARTPLIISGQSEGTSALYRRVDRF AKTLHEKDDFKIDLESKTVALTDTGIEKAEKYFNLKNLYDTDNTALTHHMDQALRANFIMLRDKDYVVQDGEVLIVDSFT GRVMDGRRYSDGLHQAIEAKEGVEIQEETKTMANITYQNLFRMYKKLSGMTGTAKTEAEEFREIYNMEVVSVPTNKPVVR VDEPDLLYPTLESKFNAVVKEIKDLHEKGQPMLIGTVAVETSEYLSQRLDEENIPHVVLNAKNHAKEADIIQNAGQRGAV TIATNMAGRGTDIKLGPGVVEIGGLAVIGTERHESRRIDNQLRGRSGRQGDPGMTQFYLSLEDDLMRRFGSDRVKSFLER MNVDGEDAVIRSRMITKQVESAQKRVEGNNYDSRKNVLQYDDVMRQQRDVMYGERNQVINQDKSLKWVLMPMIKRTVDRV VSLHTQGEQSDWDLDTLLDFGISAMVSPDKISLDDLKNKSADEIKAFFMELAEDVYAEKQKQLYDPAQMLEFEKVVLLRV VDSHWTDHIDAMDQLRQSIGLRGYGQLNPLVEYQQDGFRMFEEMISDIDYDATRLFMKSEIRQNITR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 7e-150 | 43 |
