Gene Information

Name : LVIS_0387 (LVIS_0387)
Accession : YP_794580.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 412049 - 412807 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGACAACGAAAGCAGTCGTCAGTGTCAGCGATTTAGAGAAAACGTATGGCAAACCTAATGAACGTCAGTATACAGCCTT
AAAGGGCCTTAATTTTACGGTGGACGCCGGAGAGTTCGTCGGCATCATGGGAGCATCTGGTTCGGGGAAGACCACCTTGC
TGAACATGCTATCCACACTGGATACGCCGACTAAGGGTGACGTCGTGGTTAATGGTCATGATGTGACCAAAATGCGTGGC
AACCAGTTGGCAGATTTCCGGGCCGAAGAAGTCGGTTTCATCTTCCAAGACTTTAATCTGCTAGAAAGTTTAACGGCGGA
AGAAAATATTGGCTTGCCGTTAGCATTAAAAGGAACATCGTCGAAAGTGATGGATCAAGCTATTCACGAGGTCGCAGCCA
CTTTGTCGATTTCCGATTTGTTAACGAAATATCCGGCTGAACTTTCTGGTGGGCAAAAACAACGGGTAGCGGCGGCTCGG
GCCATTGTTCATCACCCCGCAATTTTGATGGGTGATGAGCCAACCGGTGCTTTAGACTCAACCAGTGCCCGGGAACTTTT
GGACTTGATGACGACCATCAATGAACAACAGAAAATGTCCGTCCTATTAGTGACGCATGATCCCTTCTCAGCAAGCTTCT
GTCAACGGATCTTATTCATTAAAGACGGTCAGATTGGTTCAGAGTTACGGCGTGGGGAACAAGATCGGCGCGCATTTTAC
CAACAAATTTTAAATGAGCTCGGAACGTTCAACGAGTAG

Protein sequence : 
MTTKAVVSVSDLEKTYGKPNERQYTALKGLNFTVDAGEFVGIMGASGSGKTTLLNMLSTLDTPTKGDVVVNGHDVTKMRG
NQLADFRAEEVGFIFQDFNLLESLTAEENIGLPLALKGTSSKVMDQAIHEVAATLSISDLLTKYPAELSGGQKQRVAAAR
AIVHHPAILMGDEPTGALDSTSARELLDLMTTINEQQKMSVLLVTHDPFSASFCQRILFIKDGQIGSELRRGEQDRRAFY
QQILNELGTFNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_0387 YP_794580.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-41 41